G530464


Basic Information

Item Value
gene id G530464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 61312887 ~ 61313283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU600804
acatatggtatcgagggcacagctgggtgcagagggaggtctatagcaagcagcaacagtgagagacttttttctggaaaggtgaatttttagaagtagaagctcaaattgtttgggtacagataTAGATAGTAAtgcagaactctgcaggctatctttgcagtagattgcaacaccgccccctttggcagttctatcttggcggaaaacgttatagttaggaatggaaatttcaaggtttttggtgattttcctaagccaggattcagacacggctaaaacatctgggttggcagagtgtgctaaagcagtgagtaaaacaaacttagggagtaggcttctaatgttaacatgcatgaaaacaAGGCTTTTACATCtatagaagtcaacaaatgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU600804 True 397 lncRNA 0.42 1 61312887 61313283

Neighbor

gene id symbol gene type direction distance location
LOC110526274 LOC106561991 coding upstream 449427 60815583 ~ 60863460 (+)
LOC110526270 LOC106587291 coding upstream 560104 60671708 ~ 60752783 (+)
LOC110526268 LOC106587295 coding upstream 787644 60507959 ~ 60525243 (+)
LOC110526265 NA coding upstream 860617 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 880580 60430201 ~ 60432307 (+)
LOC110526277 LOC106587287 coding downstream 572550 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 602436 61903571 ~ 61960273 (+)
LOC110526279 LOC106587285 coding downstream 648103 61961386 ~ 61964415 (+)
LOC110526282 LOC106561985 coding downstream 658204 61971487 ~ 61979527 (+)
LOC110526284 LOC106587278 coding downstream 712805 62026088 ~ 62032556 (+)
G530463 NA non-coding upstream 452 61312149 ~ 61312435 (+)
G530194 NA non-coding upstream 332782 60979857 ~ 60980105 (+)
G530188 NA non-coding upstream 335233 60972481 ~ 60977654 (+)
G530181 NA non-coding upstream 343511 60969175 ~ 60969376 (+)
G530174 NA non-coding upstream 347660 60964735 ~ 60965227 (+)
G530470 NA non-coding downstream 7362 61320645 ~ 61320969 (+)
G530479 NA non-coding downstream 15681 61328964 ~ 61329180 (+)
G530732 NA non-coding downstream 30504 61343787 ~ 61344008 (+)
G530739 NA non-coding downstream 43778 61357061 ~ 61357303 (+)
G530740 NA non-coding downstream 44782 61358065 ~ 61358610 (+)
G528653 NA other upstream 1540803 59771708 ~ 59772084 (+)
G527450 NA other upstream 2533870 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2940919 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 3040051 58272079 ~ 58272836 (+)
G526547 NA other upstream 3200068 58110906 ~ 58112819 (+)
G531406 NA other downstream 836490 62149773 ~ 62152218 (+)
G532259 NA other downstream 1507137 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 1698975 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 1719648 63032931 ~ 63198734 (+)

Expression


Co-expression Network