G530740


Basic Information

Item Value
gene id G530740
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 61358065 ~ 61358610 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU601092
CATTTTACATTGGCTGTCCActgtttcaaaaacaaggattGATAGACCGTTTAAACTTCTTGAAATAAACCATTTTTGGGTTCAAATAGgctacacatttagatttgtgaccAGCCATCCAAAACATCCACAATCTGTAAGGtgtaaatagctaaatgagagagcagcagtgtggttcacatcaatgcgctatgtagatatcaataataagtgatatccgtattgctgtagactacaccactgccgtcatccttacctccaagcgtttattcaagttggataatctttggatgccgacagcagcagcaccattggaagacatagcctggactgtagcctacaaaagcctattcctgctcttttccagcgatctatcaaacacatttggtgtgtcatcatagtggtctctgacttgtggtcagactcgctcaggtggaacaaatttaaacttgcatcttttttcaatgctgatttgaatgtcattgagaaaatatAGAAGTGTCCAATATTTTTTTCAGCAAACAACCTTTCGAATTGTAAAAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU601092 True 546 lncRNA 0.39 1 61358065 61358610

Neighbor

gene id symbol gene type direction distance location
LOC110526274 LOC106561991 coding upstream 494605 60815583 ~ 60863460 (+)
LOC110526270 LOC106587291 coding upstream 605282 60671708 ~ 60752783 (+)
LOC110526268 LOC106587295 coding upstream 832822 60507959 ~ 60525243 (+)
LOC110526265 NA coding upstream 905795 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 925758 60430201 ~ 60432307 (+)
LOC110526277 LOC106587287 coding downstream 527223 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 557109 61903571 ~ 61960273 (+)
LOC110526279 LOC106587285 coding downstream 602776 61961386 ~ 61964415 (+)
LOC110526282 LOC106561985 coding downstream 612877 61971487 ~ 61979527 (+)
LOC110526284 LOC106587278 coding downstream 667478 62026088 ~ 62032556 (+)
G530739 NA non-coding upstream 762 61357061 ~ 61357303 (+)
G530732 NA non-coding upstream 14057 61343787 ~ 61344008 (+)
G530479 NA non-coding upstream 28885 61328964 ~ 61329180 (+)
G530470 NA non-coding upstream 37096 61320645 ~ 61320969 (+)
G530464 NA non-coding upstream 44782 61312887 ~ 61313283 (+)
G530875 NA non-coding downstream 78803 61437413 ~ 61437636 (+)
G530920 NA non-coding downstream 114553 61473163 ~ 61477886 (+)
G530932 NA non-coding downstream 120795 61479405 ~ 61479814 (+)
G530942 NA non-coding downstream 127561 61486171 ~ 61486376 (+)
G530951 NA non-coding downstream 137113 61495723 ~ 61496152 (+)
G528653 NA other upstream 1585981 59771708 ~ 59772084 (+)
G527450 NA other upstream 2579048 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2986097 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 3085229 58272079 ~ 58272836 (+)
G526547 NA other upstream 3245246 58110906 ~ 58112819 (+)
G531406 NA other downstream 791163 62149773 ~ 62152218 (+)
G532259 NA other downstream 1461810 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 1653648 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 1674321 63032931 ~ 63198734 (+)

Expression


Co-expression Network