Item | Value |
---|---|
gene id | G530966 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 61503976 ~ 61504246 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
Transposable element Tcb1 transposase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU601320 | True | 271 | lncRNA | 0.35 | 1 | 61503976 | 61504246 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110526274 | LOC106561991 | coding | upstream | 640516 | 60815583 ~ 60863460 (+) |
LOC110526270 | LOC106587291 | coding | upstream | 751193 | 60671708 ~ 60752783 (+) |
LOC110526268 | LOC106587295 | coding | upstream | 978733 | 60507959 ~ 60525243 (+) |
LOC110526265 | NA | coding | upstream | 1051706 | 60448606 ~ 60452270 (+) |
LOC100653452 | LOC106587300 | coding | upstream | 1071669 | 60430201 ~ 60432307 (+) |
LOC110526277 | LOC106587287 | coding | downstream | 381587 | 61885833 ~ 61902001 (+) |
LOC110526278 | LOC106587286 | coding | downstream | 411473 | 61903571 ~ 61960273 (+) |
LOC110526279 | LOC106587285 | coding | downstream | 457140 | 61961386 ~ 61964415 (+) |
LOC110526282 | LOC106561985 | coding | downstream | 467241 | 61971487 ~ 61979527 (+) |
LOC110526284 | LOC106587278 | coding | downstream | 521842 | 62026088 ~ 62032556 (+) |
G530951 | NA | non-coding | upstream | 7824 | 61495723 ~ 61496152 (+) |
G530942 | NA | non-coding | upstream | 17600 | 61486171 ~ 61486376 (+) |
G530932 | NA | non-coding | upstream | 24162 | 61479405 ~ 61479814 (+) |
G530920 | NA | non-coding | upstream | 26090 | 61473163 ~ 61477886 (+) |
G530875 | NA | non-coding | upstream | 66340 | 61437413 ~ 61437636 (+) |
G530970 | LOC106587288 | non-coding | downstream | 7200 | 61511446 ~ 61518459 (+) |
G531018 | NA | non-coding | downstream | 81982 | 61586228 ~ 61586728 (+) |
G531155 | NA | non-coding | downstream | 259438 | 61763684 ~ 61763939 (+) |
G531156 | NA | non-coding | downstream | 259723 | 61763969 ~ 61764333 (+) |
G531180 | NA | non-coding | downstream | 288561 | 61792807 ~ 61793248 (+) |
G528653 | NA | other | upstream | 1731892 | 59771708 ~ 59772084 (+) |
G527450 | NA | other | upstream | 2724959 | 58778723 ~ 58779017 (+) |
LOC110526933 | LOC106562045 | other | upstream | 3132008 | 58318920 ~ 58408967 (+) |
G526628 | LOC106587143 | other | upstream | 3231140 | 58272079 ~ 58272836 (+) |
G526547 | NA | other | upstream | 3391157 | 58110906 ~ 58112819 (+) |
G531406 | NA | other | downstream | 645527 | 62149773 ~ 62152218 (+) |
G532259 | NA | other | downstream | 1316174 | 62820420 ~ 62822616 (+) |
LOC110526311 | LOC106587159 | other | downstream | 1508012 | 63005672 ~ 63068991 (+) |
G532237 | LOC106591742 | other | downstream | 1528685 | 63032931 ~ 63198734 (+) |