Gene
RNA
| Item | Value |
|---|---|
| gene id | G530970 |
| gene name | LOC106587288 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 61511446 ~ 61518459 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cadherin-11-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU601325 | False | 695 | lncRNA | 0.54 | 3 | 61511446 | 61518459 |
| TU601326 | True | 457 | lncRNA | 0.51 | 2 | 61511446 | 61514889 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526274 | LOC106561991 | coding | upstream | 647986 | 60815583 ~ 60863460 (+) |
| LOC110526270 | LOC106587291 | coding | upstream | 758663 | 60671708 ~ 60752783 (+) |
| LOC110526268 | LOC106587295 | coding | upstream | 986203 | 60507959 ~ 60525243 (+) |
| LOC110526265 | NA | coding | upstream | 1059176 | 60448606 ~ 60452270 (+) |
| LOC100653452 | LOC106587300 | coding | upstream | 1079139 | 60430201 ~ 60432307 (+) |
| LOC110526277 | LOC106587287 | coding | downstream | 367374 | 61885833 ~ 61902001 (+) |
| LOC110526278 | LOC106587286 | coding | downstream | 397260 | 61903571 ~ 61960273 (+) |
| LOC110526279 | LOC106587285 | coding | downstream | 442927 | 61961386 ~ 61964415 (+) |
| LOC110526282 | LOC106561985 | coding | downstream | 453028 | 61971487 ~ 61979527 (+) |
| LOC110526284 | LOC106587278 | coding | downstream | 507629 | 62026088 ~ 62032556 (+) |
| G530966 | NA | non-coding | upstream | 7200 | 61503976 ~ 61504246 (+) |
| G530951 | NA | non-coding | upstream | 15294 | 61495723 ~ 61496152 (+) |
| G530942 | NA | non-coding | upstream | 25070 | 61486171 ~ 61486376 (+) |
| G530932 | NA | non-coding | upstream | 31632 | 61479405 ~ 61479814 (+) |
| G530920 | NA | non-coding | upstream | 33560 | 61473163 ~ 61477886 (+) |
| G531018 | NA | non-coding | downstream | 67769 | 61586228 ~ 61586728 (+) |
| G531155 | NA | non-coding | downstream | 245225 | 61763684 ~ 61763939 (+) |
| G531156 | NA | non-coding | downstream | 245510 | 61763969 ~ 61764333 (+) |
| G531180 | NA | non-coding | downstream | 274348 | 61792807 ~ 61793248 (+) |
| G531184 | NA | non-coding | downstream | 278870 | 61797329 ~ 61797535 (+) |
| G528653 | NA | other | upstream | 1739362 | 59771708 ~ 59772084 (+) |
| G527450 | NA | other | upstream | 2732429 | 58778723 ~ 58779017 (+) |
| LOC110526933 | LOC106562045 | other | upstream | 3139478 | 58318920 ~ 58408967 (+) |
| G526628 | LOC106587143 | other | upstream | 3238610 | 58272079 ~ 58272836 (+) |
| G526547 | NA | other | upstream | 3398627 | 58110906 ~ 58112819 (+) |
| G531406 | NA | other | downstream | 631314 | 62149773 ~ 62152218 (+) |
| G532259 | NA | other | downstream | 1301961 | 62820420 ~ 62822616 (+) |
| LOC110526311 | LOC106587159 | other | downstream | 1493799 | 63005672 ~ 63068991 (+) |
| G532237 | LOC106591742 | other | downstream | 1514472 | 63032931 ~ 63198734 (+) |
