G531180


Basic Information

Item Value
gene id G531180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 61792807 ~ 61793248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU601541
actaggtgtgTATGAGGGAATTAGACGCAGAGAGAGAATAACGGAGTAAAGTGCTTTACTATTGCACACCAAACTGATAAGCCCAATACAATACAGGGCGCAGGACACTATACCAGACAACCCAAAACCACAGGGTGTCcagtatagaaaataaaatacaccACAACCTAATATGTACACACGTAACaaaagacaatcccgcacaaaacaagggcgggtcaaactactacatatagggaagctaattaaaccaaaatacacacaggtgaaactaataagacaaaaccaacagacaaacgaaaaagggattggtagcggctagtaggacggtgacaacgaccgccgagcaccgcccgaacaggcaggggatccaacttcggcggaagtcgtgacagtatttttttaaaataaggaattatttaagaaaagtgcaAGGATGACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU601541 True 442 lncRNA 0.43 1 61792807 61793248

Neighbor

gene id symbol gene type direction distance location
LOC110526274 LOC106561991 coding upstream 929347 60815583 ~ 60863460 (+)
LOC110526270 LOC106587291 coding upstream 1040024 60671708 ~ 60752783 (+)
LOC110526268 LOC106587295 coding upstream 1267564 60507959 ~ 60525243 (+)
LOC110526265 NA coding upstream 1340537 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 1360500 60430201 ~ 60432307 (+)
LOC110526277 LOC106587287 coding downstream 92585 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 122471 61903571 ~ 61960273 (+)
LOC110526279 LOC106587285 coding downstream 168138 61961386 ~ 61964415 (+)
LOC110526282 LOC106561985 coding downstream 178239 61971487 ~ 61979527 (+)
LOC110526284 LOC106587278 coding downstream 232840 62026088 ~ 62032556 (+)
G531156 NA non-coding upstream 28474 61763969 ~ 61764333 (+)
G531155 NA non-coding upstream 28868 61763684 ~ 61763939 (+)
G531018 NA non-coding upstream 206079 61586228 ~ 61586728 (+)
G530970 LOC106587288 non-coding upstream 274348 61511446 ~ 61518459 (+)
G530966 NA non-coding upstream 288561 61503976 ~ 61504246 (+)
G531184 NA non-coding downstream 4081 61797329 ~ 61797535 (+)
G531252 NA non-coding downstream 102168 61895416 ~ 61895895 (+)
G531331 NA non-coding downstream 249092 62042340 ~ 62042547 (+)
G531332 NA non-coding downstream 249470 62042718 ~ 62042987 (+)
G528653 NA other upstream 2020723 59771708 ~ 59772084 (+)
G527450 NA other upstream 3013790 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 3420839 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 3519971 58272079 ~ 58272836 (+)
G526547 NA other upstream 3679988 58110906 ~ 58112819 (+)
G531406 NA other downstream 356525 62149773 ~ 62152218 (+)
G532259 NA other downstream 1027172 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 1219010 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 1239683 63032931 ~ 63198734 (+)

Expression


Co-expression Network