G531252


Basic Information

Item Value
gene id G531252
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 61895416 ~ 61895895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU601615
GCagaccgtcgccggaggctccgggcCGCAGACCGTCGCCAGAGGCTccggactgcagaccgtcgctggagactccggaccTTGGATAGTCTCTGGAGgctccgggccataaatcttcactggaggctccgggccatggatcatcactggaggctccgggccatggatcatcactggaggcttcgtgcgtggagcaggcacaggacgtactatGCTGGAGACACGCACTGGAGGCCGGGTgcatggagctggcacaggatatactggaccgtggaggcgcactggaggtctggaatgtagagctggcacaacccgtcc

Function

NR:

description
myosin 1, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU601615 True 318 lncRNA 0.64 3 61895416 61895895

Neighbor

gene id symbol gene type direction distance location
LOC110526274 LOC106561991 coding upstream 1031956 60815583 ~ 60863460 (+)
LOC110526270 LOC106587291 coding upstream 1142633 60671708 ~ 60752783 (+)
LOC110526268 LOC106587295 coding upstream 1370173 60507959 ~ 60525243 (+)
LOC110526265 NA coding upstream 1443146 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 1463109 60430201 ~ 60432307 (+)
LOC110526278 LOC106587286 coding downstream 19824 61903571 ~ 61960273 (+)
LOC110526279 LOC106587285 coding downstream 65491 61961386 ~ 61964415 (+)
LOC110526282 LOC106561985 coding downstream 75592 61971487 ~ 61979527 (+)
LOC110526284 LOC106587278 coding downstream 130193 62026088 ~ 62032556 (+)
LOC110526286 ca7 coding downstream 175366 62071261 ~ 62084069 (+)
G531184 NA non-coding upstream 97881 61797329 ~ 61797535 (+)
G531180 NA non-coding upstream 102168 61792807 ~ 61793248 (+)
G531156 NA non-coding upstream 131083 61763969 ~ 61764333 (+)
G531155 NA non-coding upstream 131477 61763684 ~ 61763939 (+)
G531018 NA non-coding upstream 308688 61586228 ~ 61586728 (+)
G531331 NA non-coding downstream 146445 62042340 ~ 62042547 (+)
G531332 NA non-coding downstream 146823 62042718 ~ 62042987 (+)
G531333 NA non-coding downstream 147252 62043147 ~ 62043433 (+)
G531334 NA non-coding downstream 148390 62044285 ~ 62044504 (+)
G528653 NA other upstream 2123332 59771708 ~ 59772084 (+)
G527450 NA other upstream 3116399 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 3523448 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 3622580 58272079 ~ 58272836 (+)
G526547 NA other upstream 3782597 58110906 ~ 58112819 (+)
G531406 NA other downstream 253878 62149773 ~ 62152218 (+)
G532259 NA other downstream 924525 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 1116363 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 1137036 63032931 ~ 63198734 (+)

Expression


Co-expression Network