G531332


Basic Information

Item Value
gene id G531332
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62042718 ~ 62042987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU601705
tgtaactccaagtcaatcacacttctgtgaaatcaaactgtccacttaggaagcaacactgattgacaatacatttcacatgctgttgtgcaaatggaatagacaacaggtggaaattataggcaattagcaaggcacccccaataaaggagtggttctgcaggtggtgaccacagaccacttctcagttcctatgcttcctggctgatgttttggtcacttttgaatgctggcggtgctttcactctagtggtagcatgagacggagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU601705 True 270 lncRNA 0.45 1 62042718 62042987

Neighbor

gene id symbol gene type direction distance location
LOC110526284 LOC106587278 coding upstream 10162 62026088 ~ 62032556 (+)
LOC110526282 LOC106561985 coding upstream 63193 61971487 ~ 61979527 (+)
LOC110526279 LOC106587285 coding upstream 78303 61961386 ~ 61964415 (+)
LOC110526278 LOC106587286 coding upstream 84509 61903571 ~ 61960273 (+)
LOC110526277 LOC106587287 coding upstream 140717 61885833 ~ 61902001 (+)
LOC110526286 ca7 coding downstream 28274 62071261 ~ 62084069 (+)
LOC110526289 LOC106587268 coding downstream 241383 62284370 ~ 62299748 (+)
LOC110526291 LOC106587268 coding downstream 285366 62328353 ~ 62346632 (+)
LOC110526293 LOC106587174 coding downstream 303780 62346767 ~ 62349795 (+)
LOC110526295 LOC106587266 coding downstream 334885 62377872 ~ 62386332 (+)
G531331 NA non-coding upstream 171 62042340 ~ 62042547 (+)
G531252 NA non-coding upstream 146823 61895416 ~ 61895895 (+)
G531184 NA non-coding upstream 245183 61797329 ~ 61797535 (+)
G531180 NA non-coding upstream 249470 61792807 ~ 61793248 (+)
G531333 NA non-coding downstream 160 62043147 ~ 62043433 (+)
G531334 NA non-coding downstream 1298 62044285 ~ 62044504 (+)
G531339 NA non-coding downstream 8583 62051570 ~ 62051804 (+)
G531340 NA non-coding downstream 8882 62051869 ~ 62052106 (+)
G531341 NA non-coding downstream 10011 62052998 ~ 62053208 (+)
G528653 NA other upstream 2270634 59771708 ~ 59772084 (+)
G527450 NA other upstream 3263701 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 3670750 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 3769882 58272079 ~ 58272836 (+)
G531406 NA other downstream 106786 62149773 ~ 62152218 (+)
G532259 NA other downstream 777433 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 969271 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 989944 63032931 ~ 63198734 (+)
G532489 NA other downstream 1265546 63308533 ~ 63343755 (+)

Expression


Co-expression Network