G531333


Basic Information

Item Value
gene id G531333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62043147 ~ 62043433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU601706
ggccagtacatcaggagacgtggaggaggccgtaggagggcaacaacccagcagcaagaccgctacctccgcctttgtgcaaggaggagccctgccagagccctgcaaaatgacctccagcaggccacaaatgtgcatgtgtctgctcaaagggtcagaaacagactccatgagggtggtatgagggcccgacgtccacaggtgggggttgtgcttacagcccaacaccgtgcaggacgtttggcatttgccagagaacaccaggattggcaaattcgccactggcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU601706 True 287 lncRNA 0.59 1 62043147 62043433

Neighbor

gene id symbol gene type direction distance location
LOC110526284 LOC106587278 coding upstream 10591 62026088 ~ 62032556 (+)
LOC110526282 LOC106561985 coding upstream 63622 61971487 ~ 61979527 (+)
LOC110526279 LOC106587285 coding upstream 78732 61961386 ~ 61964415 (+)
LOC110526278 LOC106587286 coding upstream 84938 61903571 ~ 61960273 (+)
LOC110526277 LOC106587287 coding upstream 141146 61885833 ~ 61902001 (+)
LOC110526286 ca7 coding downstream 27828 62071261 ~ 62084069 (+)
LOC110526289 LOC106587268 coding downstream 240937 62284370 ~ 62299748 (+)
LOC110526291 LOC106587268 coding downstream 284920 62328353 ~ 62346632 (+)
LOC110526293 LOC106587174 coding downstream 303334 62346767 ~ 62349795 (+)
LOC110526295 LOC106587266 coding downstream 334439 62377872 ~ 62386332 (+)
G531332 NA non-coding upstream 160 62042718 ~ 62042987 (+)
G531331 NA non-coding upstream 600 62042340 ~ 62042547 (+)
G531252 NA non-coding upstream 147252 61895416 ~ 61895895 (+)
G531184 NA non-coding upstream 245612 61797329 ~ 61797535 (+)
G531334 NA non-coding downstream 852 62044285 ~ 62044504 (+)
G531339 NA non-coding downstream 8137 62051570 ~ 62051804 (+)
G531340 NA non-coding downstream 8436 62051869 ~ 62052106 (+)
G531341 NA non-coding downstream 9565 62052998 ~ 62053208 (+)
G531345 NA non-coding downstream 13131 62056564 ~ 62056797 (+)
G528653 NA other upstream 2271063 59771708 ~ 59772084 (+)
G527450 NA other upstream 3264130 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 3671179 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 3770311 58272079 ~ 58272836 (+)
G531406 NA other downstream 106340 62149773 ~ 62152218 (+)
G532259 NA other downstream 776987 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 968825 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 989498 63032931 ~ 63198734 (+)
G532489 NA other downstream 1265100 63308533 ~ 63343755 (+)

Expression


Co-expression Network