G531340


Basic Information

Item Value
gene id G531340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62051869 ~ 62052106 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU601713
ccgtagagcttcaagacaggaatgtgtcgaggaacagatctggggaagggtaccaaaacatttatgcagcattgaaggtccccaaaaacacagtggcctccatcattcttaaataggctgcctagccaaactgagcaatcgggggagaagggccttggtcagggaggggaccatgaacccaatggttactcttacagagctccagagttcctctgtggagatgggagaaccttccaga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU601713 True 238 lncRNA 0.51 1 62051869 62052106

Neighbor

gene id symbol gene type direction distance location
LOC110526284 LOC106587278 coding upstream 19313 62026088 ~ 62032556 (+)
LOC110526282 LOC106561985 coding upstream 72344 61971487 ~ 61979527 (+)
LOC110526279 LOC106587285 coding upstream 87454 61961386 ~ 61964415 (+)
LOC110526278 LOC106587286 coding upstream 93660 61903571 ~ 61960273 (+)
LOC110526277 LOC106587287 coding upstream 149868 61885833 ~ 61902001 (+)
LOC110526286 ca7 coding downstream 19155 62071261 ~ 62084069 (+)
LOC110526289 LOC106587268 coding downstream 232264 62284370 ~ 62299748 (+)
LOC110526291 LOC106587268 coding downstream 276247 62328353 ~ 62346632 (+)
LOC110526293 LOC106587174 coding downstream 294661 62346767 ~ 62349795 (+)
LOC110526295 LOC106587266 coding downstream 325766 62377872 ~ 62386332 (+)
G531339 NA non-coding upstream 65 62051570 ~ 62051804 (+)
G531334 NA non-coding upstream 7365 62044285 ~ 62044504 (+)
G531333 NA non-coding upstream 8436 62043147 ~ 62043433 (+)
G531332 NA non-coding upstream 8882 62042718 ~ 62042987 (+)
G531331 NA non-coding upstream 9322 62042340 ~ 62042547 (+)
G531341 NA non-coding downstream 892 62052998 ~ 62053208 (+)
G531345 NA non-coding downstream 4458 62056564 ~ 62056797 (+)
G531346 NA non-coding downstream 4810 62056916 ~ 62057147 (+)
G531410 NA non-coding downstream 108415 62160521 ~ 62183351 (+)
G531418 NA non-coding downstream 269415 62321521 ~ 62321951 (+)
G528653 NA other upstream 2279785 59771708 ~ 59772084 (+)
G527450 NA other upstream 3272852 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 3679901 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 3779033 58272079 ~ 58272836 (+)
G531406 NA other downstream 97667 62149773 ~ 62152218 (+)
G532259 NA other downstream 768314 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 960152 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 980825 63032931 ~ 63198734 (+)
G532489 NA other downstream 1256427 63308533 ~ 63343755 (+)

Expression


Co-expression Network