Gene
RNA
| Item | Value |
|---|---|
| gene id | G531346 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 62056916 ~ 62057147 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU601719 | True | 232 | lncRNA | 0.44 | 1 | 62056916 | 62057147 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526284 | LOC106587278 | coding | upstream | 24360 | 62026088 ~ 62032556 (+) |
| LOC110526282 | LOC106561985 | coding | upstream | 77391 | 61971487 ~ 61979527 (+) |
| LOC110526279 | LOC106587285 | coding | upstream | 92501 | 61961386 ~ 61964415 (+) |
| LOC110526278 | LOC106587286 | coding | upstream | 98707 | 61903571 ~ 61960273 (+) |
| LOC110526277 | LOC106587287 | coding | upstream | 154915 | 61885833 ~ 61902001 (+) |
| LOC110526286 | ca7 | coding | downstream | 14114 | 62071261 ~ 62084069 (+) |
| LOC110526289 | LOC106587268 | coding | downstream | 227223 | 62284370 ~ 62299748 (+) |
| LOC110526291 | LOC106587268 | coding | downstream | 271206 | 62328353 ~ 62346632 (+) |
| LOC110526293 | LOC106587174 | coding | downstream | 289620 | 62346767 ~ 62349795 (+) |
| LOC110526295 | LOC106587266 | coding | downstream | 320725 | 62377872 ~ 62386332 (+) |
| G531345 | NA | non-coding | upstream | 119 | 62056564 ~ 62056797 (+) |
| G531341 | NA | non-coding | upstream | 3708 | 62052998 ~ 62053208 (+) |
| G531340 | NA | non-coding | upstream | 4810 | 62051869 ~ 62052106 (+) |
| G531339 | NA | non-coding | upstream | 5112 | 62051570 ~ 62051804 (+) |
| G531334 | NA | non-coding | upstream | 12412 | 62044285 ~ 62044504 (+) |
| G531410 | NA | non-coding | downstream | 103374 | 62160521 ~ 62183351 (+) |
| G531418 | NA | non-coding | downstream | 264374 | 62321521 ~ 62321951 (+) |
| G531510 | NA | non-coding | downstream | 444640 | 62501787 ~ 62506601 (+) |
| G531544 | NA | non-coding | downstream | 503716 | 62560863 ~ 62561065 (+) |
| G531511 | NA | non-coding | downstream | 507881 | 62565028 ~ 62565767 (+) |
| G528653 | NA | other | upstream | 2284832 | 59771708 ~ 59772084 (+) |
| G527450 | NA | other | upstream | 3277899 | 58778723 ~ 58779017 (+) |
| LOC110526933 | LOC106562045 | other | upstream | 3684948 | 58318920 ~ 58408967 (+) |
| G526628 | LOC106587143 | other | upstream | 3784080 | 58272079 ~ 58272836 (+) |
| G531406 | NA | other | downstream | 92626 | 62149773 ~ 62152218 (+) |
| G532259 | NA | other | downstream | 763273 | 62820420 ~ 62822616 (+) |
| LOC110526311 | LOC106587159 | other | downstream | 955111 | 63005672 ~ 63068991 (+) |
| G532237 | LOC106591742 | other | downstream | 975784 | 63032931 ~ 63198734 (+) |
| G532489 | NA | other | downstream | 1251386 | 63308533 ~ 63343755 (+) |
