G531410


Basic Information

Item Value
gene id G531410
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62160521 ~ 62183351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU601791
tcacaccctgacctaaccacatagagaaataaaacggctctctaaggtcagggcgtgacagataagGGCTTTTGTGAGTGAATTAAGAAGAAGGAGAGAATACTGTTGAGTAATAAATACATGAAAAATGATGCTGTAGAAGATCTTATCGGCTCCttaatgtcacgaaccaaatgtagacctctcgcaaaatctgttcctgccgaaacccgggat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU601791 True 216 lncRNA 0.42 2 62160521 62183351

Neighbor

gene id symbol gene type direction distance location
LOC110526286 ca7 coding upstream 76452 62071261 ~ 62084069 (+)
LOC110526284 LOC106587278 coding upstream 127965 62026088 ~ 62032556 (+)
LOC110526282 LOC106561985 coding upstream 180996 61971487 ~ 61979527 (+)
LOC110526279 LOC106587285 coding upstream 196106 61961386 ~ 61964415 (+)
LOC110526278 LOC106587286 coding upstream 202312 61903571 ~ 61960273 (+)
LOC110526289 LOC106587268 coding downstream 101019 62284370 ~ 62299748 (+)
LOC110526291 LOC106587268 coding downstream 145002 62328353 ~ 62346632 (+)
LOC110526293 LOC106587174 coding downstream 163416 62346767 ~ 62349795 (+)
LOC110526295 LOC106587266 coding downstream 194521 62377872 ~ 62386332 (+)
LOC110526297 LOC106587264 coding downstream 276970 62460321 ~ 62464733 (+)
G531346 NA non-coding upstream 103374 62056916 ~ 62057147 (+)
G531345 NA non-coding upstream 103724 62056564 ~ 62056797 (+)
G531341 NA non-coding upstream 107313 62052998 ~ 62053208 (+)
G531340 NA non-coding upstream 108415 62051869 ~ 62052106 (+)
G531339 NA non-coding upstream 108717 62051570 ~ 62051804 (+)
G531418 NA non-coding downstream 138170 62321521 ~ 62321951 (+)
G531510 NA non-coding downstream 318436 62501787 ~ 62506601 (+)
G531544 NA non-coding downstream 377512 62560863 ~ 62561065 (+)
G531511 NA non-coding downstream 381677 62565028 ~ 62565767 (+)
G531551 NA non-coding downstream 389521 62572872 ~ 62573091 (+)
G531406 NA other upstream 8303 62149773 ~ 62152218 (+)
G528653 NA other upstream 2388437 59771708 ~ 59772084 (+)
G527450 NA other upstream 3381504 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 3788553 58318920 ~ 58408967 (+)
G532259 NA other downstream 637069 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 828907 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 849580 63032931 ~ 63198734 (+)
G532489 NA other downstream 1125182 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other downstream 1154885 63338236 ~ 63549030 (+)

Expression


Co-expression Network