G531418


Basic Information

Item Value
gene id G531418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62321521 ~ 62321951 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU601806
CACTTGTTCCACGACATTCAATTCCTCGAGGGACAGTGGGTGTTCAGGATCATTAATGGATCTGATGAGATCAAATATTTATCTGTCGTCGATGGGATCAGCAACATCTTCGTCTTCGTCCTTTGCGGTCTGAAGTCTCTCGCCTGTTCGTTGAAAAATCAAGGGATTTGCGTTCTCTAAACCGGTCCCCACTGACATTGTGATGTTGCAATTACAGAAATATGGTATACTTGTTTGCGCTATCGTTTTTTACTCTGGACCACGGGAGTGAACGATCGACTTCCGGA

Function

NR:

description
mitotic spindle-associated MMXD complex subunit MIP18-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU601806 True 287 lncRNA 0.45 2 62321521 62321951

Neighbor

gene id symbol gene type direction distance location
LOC110526289 LOC106587268 coding upstream 21773 62284370 ~ 62299748 (+)
LOC110526286 ca7 coding upstream 237452 62071261 ~ 62084069 (+)
LOC110526284 LOC106587278 coding upstream 288965 62026088 ~ 62032556 (+)
LOC110526282 LOC106561985 coding upstream 341996 61971487 ~ 61979527 (+)
LOC110526279 LOC106587285 coding upstream 357106 61961386 ~ 61964415 (+)
LOC110526291 LOC106587268 coding downstream 6402 62328353 ~ 62346632 (+)
LOC110526293 LOC106587174 coding downstream 24816 62346767 ~ 62349795 (+)
LOC110526295 LOC106587266 coding downstream 55921 62377872 ~ 62386332 (+)
LOC110526297 LOC106587264 coding downstream 138370 62460321 ~ 62464733 (+)
LOC110526300 tpc2l coding downstream 168131 62490082 ~ 62491688 (+)
G531410 NA non-coding upstream 138170 62160521 ~ 62183351 (+)
G531346 NA non-coding upstream 264374 62056916 ~ 62057147 (+)
G531345 NA non-coding upstream 264724 62056564 ~ 62056797 (+)
G531341 NA non-coding upstream 268313 62052998 ~ 62053208 (+)
G531340 NA non-coding upstream 269415 62051869 ~ 62052106 (+)
G531510 NA non-coding downstream 179836 62501787 ~ 62506601 (+)
G531544 NA non-coding downstream 238912 62560863 ~ 62561065 (+)
G531511 NA non-coding downstream 243077 62565028 ~ 62565767 (+)
G531551 NA non-coding downstream 250921 62572872 ~ 62573091 (+)
G531553 NA non-coding downstream 252934 62574885 ~ 62575117 (+)
G531406 NA other upstream 169303 62149773 ~ 62152218 (+)
G528653 NA other upstream 2549437 59771708 ~ 59772084 (+)
G527450 NA other upstream 3542504 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 3949553 58318920 ~ 58408967 (+)
G532259 NA other downstream 498469 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 690307 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 710980 63032931 ~ 63198734 (+)
G532489 NA other downstream 986582 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other downstream 1016285 63338236 ~ 63549030 (+)

Expression


Co-expression Network