Gene
RNA
| Item | Value |
|---|---|
| gene id | G531511 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 62565028 ~ 62565767 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein CBFA2T3-like isoform X6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU601903 | True | 740 | lncRNA | 0.54 | 1 | 62565028 | 62565767 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526300 | tpc2l | coding | upstream | 73340 | 62490082 ~ 62491688 (+) |
| LOC110526297 | LOC106587264 | coding | upstream | 100295 | 62460321 ~ 62464733 (+) |
| LOC110526295 | LOC106587266 | coding | upstream | 178696 | 62377872 ~ 62386332 (+) |
| LOC110526293 | LOC106587174 | coding | upstream | 215233 | 62346767 ~ 62349795 (+) |
| LOC110526291 | LOC106587268 | coding | upstream | 218396 | 62328353 ~ 62346632 (+) |
| LOC118965084 | NA | coding | downstream | 2282 | 62568049 ~ 62569967 (+) |
| LOC110526303 | acsf3 | coding | downstream | 82361 | 62648128 ~ 62685350 (+) |
| LOC110526307 | LOC106587258 | coding | downstream | 157678 | 62723445 ~ 62742080 (+) |
| LOC110526939 | LOC106562161 | coding | downstream | 186939 | 62752706 ~ 62947192 (+) |
| LOC110526308 | LOC106562160 | coding | downstream | 382351 | 62948118 ~ 62965825 (+) |
| G531544 | NA | non-coding | upstream | 3963 | 62560863 ~ 62561065 (+) |
| G531510 | NA | non-coding | upstream | 58427 | 62501787 ~ 62506601 (+) |
| G531418 | NA | non-coding | upstream | 243077 | 62321521 ~ 62321951 (+) |
| G531410 | NA | non-coding | upstream | 381677 | 62160521 ~ 62183351 (+) |
| G531346 | NA | non-coding | upstream | 507881 | 62056916 ~ 62057147 (+) |
| G531551 | NA | non-coding | downstream | 7105 | 62572872 ~ 62573091 (+) |
| G531553 | NA | non-coding | downstream | 9118 | 62574885 ~ 62575117 (+) |
| G531563 | NA | non-coding | downstream | 27806 | 62593573 ~ 62593787 (+) |
| G531589 | NA | non-coding | downstream | 92763 | 62658530 ~ 62658844 (+) |
| G531596 | NA | non-coding | downstream | 103974 | 62669741 ~ 62670041 (+) |
| G531406 | NA | other | upstream | 412810 | 62149773 ~ 62152218 (+) |
| LOC110526282 | LOC106561985 | other | upstream | 585501 | 61971487 ~ 61979527 (+) |
| G528653 | NA | other | upstream | 2792944 | 59771708 ~ 59772084 (+) |
| G527450 | NA | other | upstream | 3786011 | 58778723 ~ 58779017 (+) |
| LOC110526933 | LOC106562045 | other | upstream | 4193060 | 58318920 ~ 58408967 (+) |
| G532259 | NA | other | downstream | 254653 | 62820420 ~ 62822616 (+) |
| LOC110526311 | LOC106587159 | other | downstream | 446491 | 63005672 ~ 63068991 (+) |
| G532237 | LOC106591742 | other | downstream | 467164 | 63032931 ~ 63198734 (+) |
| G532489 | NA | other | downstream | 742766 | 63308533 ~ 63343755 (+) |
| LOC100750227 | LOC106587244 | other | downstream | 772469 | 63338236 ~ 63549030 (+) |
