G531589


Basic Information

Item Value
gene id G531589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62658530 ~ 62658844 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU601993
atcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaactgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaagttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgttgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU601993 True 315 lncRNA 0.39 1 62658530 62658844

Neighbor

gene id symbol gene type direction distance location
LOC118965084 NA coding upstream 88563 62568049 ~ 62569967 (+)
LOC110526300 tpc2l coding upstream 166842 62490082 ~ 62491688 (+)
LOC110526297 LOC106587264 coding upstream 193797 62460321 ~ 62464733 (+)
LOC110526295 LOC106587266 coding upstream 272198 62377872 ~ 62386332 (+)
LOC110526293 LOC106587174 coding upstream 308735 62346767 ~ 62349795 (+)
LOC110526307 LOC106587258 coding downstream 64601 62723445 ~ 62742080 (+)
LOC110526939 LOC106562161 coding downstream 93862 62752706 ~ 62947192 (+)
LOC110526308 LOC106562160 coding downstream 289274 62948118 ~ 62965825 (+)
LOC110526311 LOC106587159 coding downstream 346828 63005672 ~ 63068991 (+)
LOC118965038 LOC106562187 coding downstream 460383 63119227 ~ 63176699 (+)
G531563 NA non-coding upstream 64743 62593573 ~ 62593787 (+)
G531553 NA non-coding upstream 83413 62574885 ~ 62575117 (+)
G531551 NA non-coding upstream 85439 62572872 ~ 62573091 (+)
G531511 NA non-coding upstream 92763 62565028 ~ 62565767 (+)
G531544 NA non-coding upstream 97465 62560863 ~ 62561065 (+)
G531596 NA non-coding downstream 10897 62669741 ~ 62670041 (+)
LOC110526303 acsf3 non-coding downstream 13047 62648128 ~ 62685350 (+)
G532210 NA non-coding downstream 27307 62686151 ~ 62686431 (+)
G532222 NA non-coding downstream 44696 62703540 ~ 62703758 (+)
G532233 NA non-coding downstream 53396 62712240 ~ 62712624 (+)
G531406 NA other upstream 506312 62149773 ~ 62152218 (+)
LOC110526282 LOC106561985 other upstream 679003 61971487 ~ 61979527 (+)
G528653 NA other upstream 2886446 59771708 ~ 59772084 (+)
G527450 NA other upstream 3879513 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 4286562 58318920 ~ 58408967 (+)
G532259 NA other downstream 161576 62820420 ~ 62822616 (+)
G532237 LOC106591742 other downstream 374087 63032931 ~ 63198734 (+)
G532489 NA other downstream 649689 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other downstream 679392 63338236 ~ 63549030 (+)

Expression


Co-expression Network