G532210


Basic Information

Item Value
gene id G532210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62686151 ~ 62686431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU602694
cacccggcttcttcacctgcgggatcgtctgagaccagccactcggacagctgatgaaactgggtttgcacaaccaaataatttctgcacactgtcagaaaccgtctcagggaagctcatctgcgtgctcttcatcctcaccagggtcttgacctaatTGCAGTTTTGTAAACAACTTCAGCTGGAAAATGCTCACCTACGAGGGCCAcaggcatgctggagaagtgctcTTCAGGTATGAATCCcgttttcaactgtactgggcacaCAGCATGTATGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU602694 True 281 lncRNA 0.51 1 62686151 62686431

Neighbor

gene id symbol gene type direction distance location
LOC110526303 acsf3 coding upstream 2949 62648128 ~ 62685350 (+)
LOC118965084 NA coding upstream 116184 62568049 ~ 62569967 (+)
LOC110526300 tpc2l coding upstream 194463 62490082 ~ 62491688 (+)
LOC110526297 LOC106587264 coding upstream 221418 62460321 ~ 62464733 (+)
LOC110526295 LOC106587266 coding upstream 299819 62377872 ~ 62386332 (+)
LOC110526307 LOC106587258 coding downstream 37014 62723445 ~ 62742080 (+)
LOC110526939 LOC106562161 coding downstream 66275 62752706 ~ 62947192 (+)
LOC110526308 LOC106562160 coding downstream 261687 62948118 ~ 62965825 (+)
LOC110526311 LOC106587159 coding downstream 319241 63005672 ~ 63068991 (+)
LOC118965038 LOC106562187 coding downstream 432796 63119227 ~ 63176699 (+)
G531596 NA non-coding upstream 16110 62669741 ~ 62670041 (+)
G531589 NA non-coding upstream 27307 62658530 ~ 62658844 (+)
G531563 NA non-coding upstream 92364 62593573 ~ 62593787 (+)
G531553 NA non-coding upstream 111034 62574885 ~ 62575117 (+)
G532222 NA non-coding downstream 17109 62703540 ~ 62703758 (+)
G532233 NA non-coding downstream 25809 62712240 ~ 62712624 (+)
G532234 NA non-coding downstream 26297 62712728 ~ 62712939 (+)
G532263 NA non-coding downstream 26701 62713132 ~ 62713348 (+)
G532270 NA non-coding downstream 55757 62742188 ~ 62742939 (+)
G531406 NA other upstream 533933 62149773 ~ 62152218 (+)
LOC110526282 LOC106561985 other upstream 706624 61971487 ~ 61979527 (+)
G528653 NA other upstream 2914067 59771708 ~ 59772084 (+)
G527450 NA other upstream 3907134 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 4314183 58318920 ~ 58408967 (+)
G532259 NA other downstream 133989 62820420 ~ 62822616 (+)
G532237 LOC106591742 other downstream 346500 63032931 ~ 63198734 (+)
G532489 NA other downstream 622102 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other downstream 651805 63338236 ~ 63549030 (+)

Expression


Co-expression Network