G532765


Basic Information

Item Value
gene id G532765
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62820759 ~ 62821513 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU603356
tcctcctcacaacacagagacccgcctctcctcctatcacaacagagacccgcctctcctcctatcacaacagagacccgcctctcctcctatcacaatACTGAgtccagcctctcctcctctccctgttacaacactgagaccttcctctcctccctatcacAACACTGAGATCTGCCACTCCTCCTATCACAATCACAACACTGAGACCagcctctcctcctatcacaatCACAACACTGAGACCagcctctcctcctatcacaatCACAACACTGAGACCAACCTCTCCTCCTAATCACAATCACAACACTGAGACCagcctctcctcctatcacaatCACAACACTGAgaccagcctctcctcctctccctgtcataaAGGaaacctgcctctcctcctcctatcacaagacagagaccatcctctcctcctcacaacaccgAAACCTGCTAATCCTCATCACAACACTGAGACCTTcctctcctgcactccctgttacAACATTGAGACctgtctctactcctctccctgtcaCAATATTGAGaccagcctctcctcctcccccaaaaACACTGAAACCtgcctctccacctccacctgtaACACTGAAACCtgcctctccacctccacctgtaacactgaaacatgcctctcctcctctccctgtcacaACATTGAGACctgtctctactcctctccctatCACCACACAGAAACCTgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU603356 True 725 lncRNA 0.52 2 62820759 62821513

Neighbor

gene id symbol gene type direction distance location
LOC110526305 LOC106587257 coding downstream 72378 62742187 ~ 62748381 (-)
LOC110526304 NA coding downstream 173584 62623295 ~ 62647175 (-)
LOC110526302 LOC106562167 coding downstream 254545 62500665 ~ 62566214 (-)
pabpn1l LOC106587263 coding downstream 325955 62491676 ~ 62494804 (-)
LOC110526298 galns coding downstream 330612 62467186 ~ 62490147 (-)
LOC110526309 dpep1 coding upstream 144702 62966215 ~ 62974919 (-)
LOC110526310 LOC106587159 coding upstream 163973 62985486 ~ 62991995 (-)
LOC118936659 LOC106581595 coding upstream 211416 63032929 ~ 63035742 (-)
LOC118964917 NA coding upstream 260706 63082219 ~ 63084974 (-)
LOC118964916 LOC106581595 coding upstream 265549 63087062 ~ 63089877 (-)
G532706 NA non-coding downstream 102662 62717897 ~ 62718097 (-)
G532223 NA non-coding downstream 117069 62703472 ~ 62703690 (-)
G532215 NA non-coding downstream 126463 62694058 ~ 62694296 (-)
G532209 NA non-coding downstream 135414 62683245 ~ 62685345 (-)
G532203 NA non-coding downstream 149146 62671403 ~ 62671613 (-)
G532779 NA non-coding upstream 36239 62857752 ~ 62859570 (-)
G532762 NA non-coding upstream 67631 62889144 ~ 62889671 (-)
G532833 NA non-coding upstream 122596 62944109 ~ 62947150 (-)
G532846 NA non-coding upstream 137665 62959178 ~ 62959401 (-)
G532847 NA non-coding upstream 139187 62960700 ~ 62961839 (-)
znf536 LOC106562015 other downstream 3123796 59507092 ~ 59698393 (-)
G527449 NA other downstream 4042292 58777782 ~ 58778467 (-)
G526903 NA other downstream 4561783 58258552 ~ 58258976 (-)
G526784 dhcr7 other downstream 4665843 58151850 ~ 58154916 (-)
G532766 NA other upstream 1392 62822905 ~ 62855007 (-)
G532763 NA other upstream 30183 62851696 ~ 62852817 (-)
igdcc3 LOC106562146 other upstream 1002386 63823887 ~ 63944930 (-)
G534201 NA other upstream 1676940 64498453 ~ 64499614 (-)

Expression


Co-expression Network