G532370


Basic Information

Item Value
gene id G532370
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62978271 ~ 62978487 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU602881
AGGAAACATTCACAGCTGACATATTTACAGTGCCCGACCACACAAATGTGCCTTTTCAACATGCAACAATATCAGagatactgtatatccacagaaGCCTGTGAACTCTACCAGAGCGACCCCGTCTTCCACAGAAAATTCATATTGAACTAGTCCGATATTTAATTGTTACAGATATGGCTGGTATACAAACACGCATTTGATAACGCTAGTACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU602881 True 217 lncRNA 0.41 1 62978271 62978487

Neighbor

gene id symbol gene type direction distance location
LOC110526308 LOC106562160 coding upstream 12446 62948118 ~ 62965825 (+)
LOC110526939 LOC106562161 coding upstream 31079 62752706 ~ 62947192 (+)
LOC110526307 LOC106587258 coding upstream 236191 62723445 ~ 62742080 (+)
LOC110526303 acsf3 coding upstream 295069 62648128 ~ 62685350 (+)
LOC118965084 NA coding upstream 408304 62568049 ~ 62569967 (+)
LOC110526311 LOC106587159 coding downstream 27185 63005672 ~ 63068991 (+)
LOC118965038 LOC106562187 coding downstream 140740 63119227 ~ 63176699 (+)
LOC110526312 LOC106562187 coding downstream 185365 63163852 ~ 63175505 (+)
LOC110526940 LOC106587158 coding downstream 222915 63201402 ~ 63210821 (+)
mcee LOC106587249 coding downstream 263899 63242386 ~ 63243598 (+)
G532362 NA non-coding upstream 22065 62955965 ~ 62956206 (+)
G532338 NA non-coding upstream 89818 62887817 ~ 62888453 (+)
G532325 NA non-coding upstream 108409 62869429 ~ 62869862 (+)
G532322 NA non-coding upstream 129382 62846516 ~ 62848889 (+)
G532372 NA non-coding downstream 3126 62981613 ~ 62981835 (+)
G532374 NA non-coding downstream 5451 62983938 ~ 62984188 (+)
G532381 NA non-coding downstream 18055 62996542 ~ 62996878 (+)
G532237 LOC106591742 non-coding downstream 54444 63032931 ~ 63198734 (+)
G532399 NA non-coding downstream 71463 63049950 ~ 63099165 (+)
G532259 NA other upstream 155655 62820420 ~ 62822616 (+)
G531406 NA other upstream 826053 62149773 ~ 62152218 (+)
LOC110526282 LOC106561985 other upstream 998744 61971487 ~ 61979527 (+)
G528653 NA other upstream 3206187 59771708 ~ 59772084 (+)
G527450 NA other upstream 4199254 58778723 ~ 58779017 (+)
G532489 NA other downstream 330046 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other downstream 359749 63338236 ~ 63549030 (+)
LOC110526344 LOC106587225 other downstream 1790660 64769099 ~ 64781704 (+)

Expression


Co-expression Network