Gene
RNA
| Item | Value |
|---|---|
| gene id | G533240 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 63738964 ~ 63739212 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU603892 | True | 249 | lncRNA | 0.40 | 1 | 63738964 | 63739212 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526325 | ctdspl2 | coding | upstream | 11134 | 63702297 ~ 63727830 (+) |
| golm2 | casc4 | coding | upstream | 39849 | 63684063 ~ 63699115 (+) |
| LOC110526321 | LOC106562150 | coding | upstream | 63767 | 63528470 ~ 63675197 (+) |
| LOC100750227 | LOC106587244 | coding | upstream | 211118 | 63338236 ~ 63549030 (+) |
| apba2b | LOC106587247 | coding | upstream | 415393 | 63250592 ~ 63323571 (+) |
| LOC110526326 | eif3j | coding | downstream | 19031 | 63758243 ~ 63762887 (+) |
| LOC110526331 | LOC106587235 | coding | downstream | 287473 | 64026685 ~ 64032292 (+) |
| insyn1 | LOC106587233 | coding | downstream | 478962 | 64218174 ~ 64277755 (+) |
| LOC110526337 | LOC106587231 | coding | downstream | 755607 | 64494819 ~ 64499621 (+) |
| LOC110526343 | LOC106587228 | coding | downstream | 1013817 | 64753029 ~ 64765798 (+) |
| G533228 | NA | non-coding | upstream | 24529 | 63714119 ~ 63714435 (+) |
| G532519 | NA | non-coding | upstream | 376908 | 63361843 ~ 63362056 (+) |
| G532506 | NA | non-coding | upstream | 393496 | 63345187 ~ 63345468 (+) |
| strc1 | LOC106587240 | non-coding | downstream | 3420 | 63730434 ~ 63757238 (+) |
| G533245 | NA | non-coding | downstream | 5281 | 63744493 ~ 63744739 (+) |
| G533243 | NA | non-coding | downstream | 18226 | 63757438 ~ 63757964 (+) |
| G533337 | NA | non-coding | downstream | 55993 | 63795205 ~ 63795548 (+) |
| G533339 | NA | non-coding | downstream | 56517 | 63795729 ~ 63800824 (+) |
| G532489 | NA | other | upstream | 395209 | 63308533 ~ 63343755 (+) |
| G532237 | LOC106591742 | other | upstream | 540230 | 63032931 ~ 63198734 (+) |
| LOC110526311 | LOC106587159 | other | upstream | 723978 | 63005672 ~ 63068991 (+) |
| G532259 | NA | other | upstream | 916348 | 62820420 ~ 62822616 (+) |
| LOC110526344 | LOC106587225 | other | downstream | 1029935 | 64769099 ~ 64781704 (+) |
| G534453 | NA | other | downstream | 1051110 | 64790322 ~ 64847104 (+) |
| G534653 | NA | other | downstream | 1374068 | 65113280 ~ 65169563 (+) |
| LOC110526356 | LOC106587213 | other | downstream | 1417297 | 65065380 ~ 65178884 (+) |
| G535150 | LOC106587155 | other | downstream | 2108411 | 65847623 ~ 65849441 (+) |
