Gene
RNA
| Item | Value |
|---|---|
| gene id | G533245 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 63744493 ~ 63744739 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU603897 | True | 247 | lncRNA | 0.38 | 1 | 63744493 | 63744739 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526325 | ctdspl2 | coding | upstream | 16663 | 63702297 ~ 63727830 (+) |
| golm2 | casc4 | coding | upstream | 45378 | 63684063 ~ 63699115 (+) |
| LOC110526321 | LOC106562150 | coding | upstream | 69296 | 63528470 ~ 63675197 (+) |
| LOC100750227 | LOC106587244 | coding | upstream | 216647 | 63338236 ~ 63549030 (+) |
| apba2b | LOC106587247 | coding | upstream | 420922 | 63250592 ~ 63323571 (+) |
| LOC110526326 | eif3j | coding | downstream | 13504 | 63758243 ~ 63762887 (+) |
| LOC110526331 | LOC106587235 | coding | downstream | 281946 | 64026685 ~ 64032292 (+) |
| insyn1 | LOC106587233 | coding | downstream | 473435 | 64218174 ~ 64277755 (+) |
| LOC110526337 | LOC106587231 | coding | downstream | 750080 | 64494819 ~ 64499621 (+) |
| LOC110526343 | LOC106587228 | coding | downstream | 1008290 | 64753029 ~ 64765798 (+) |
| strc1 | LOC106587240 | non-coding | upstream | 1528 | 63730434 ~ 63757238 (+) |
| G533240 | NA | non-coding | upstream | 5281 | 63738964 ~ 63739212 (+) |
| G533228 | NA | non-coding | upstream | 30058 | 63714119 ~ 63714435 (+) |
| G533243 | NA | non-coding | downstream | 12699 | 63757438 ~ 63757964 (+) |
| G533337 | NA | non-coding | downstream | 50466 | 63795205 ~ 63795548 (+) |
| G533339 | NA | non-coding | downstream | 50990 | 63795729 ~ 63800824 (+) |
| G533351 | NA | non-coding | downstream | 67963 | 63812702 ~ 63812909 (+) |
| G533359 | NA | non-coding | downstream | 79190 | 63823929 ~ 63824926 (+) |
| G532489 | NA | other | upstream | 400738 | 63308533 ~ 63343755 (+) |
| G532237 | LOC106591742 | other | upstream | 545759 | 63032931 ~ 63198734 (+) |
| LOC110526311 | LOC106587159 | other | upstream | 729507 | 63005672 ~ 63068991 (+) |
| G532259 | NA | other | upstream | 921877 | 62820420 ~ 62822616 (+) |
| LOC110526344 | LOC106587225 | other | downstream | 1024408 | 64769099 ~ 64781704 (+) |
| G534453 | NA | other | downstream | 1045583 | 64790322 ~ 64847104 (+) |
| G534653 | NA | other | downstream | 1368541 | 65113280 ~ 65169563 (+) |
| LOC110526356 | LOC106587213 | other | downstream | 1411770 | 65065380 ~ 65178884 (+) |
| G535150 | LOC106587155 | other | downstream | 2102884 | 65847623 ~ 65849441 (+) |
