G533325



Basic Information


Item Value
gene id G533325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 63787584 ~ 63787786 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU603986
GATCATAGAGAGCCTTTGTTTTTCTATGGTATAGTAGGTCAGGACGTGACTGGGGGGTTTTCTAGttattattttctatgtggggttctagtttagtttttctatgttggtgtttggtatgattcccaattagaggcagctggctatcgttgtctctaattggggatcatatttaagtagcattttttccacctgtgttttat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU603986 True 203 lncRNA 0.38 1 63787584 63787786
Loading

Neighbor


gene id symbol gene type direction distance location
cilp LOC106587239 coding downstream 14519 63764660 ~ 63773065 (-)
terb2 terb2 coding downstream 449643 63334916 ~ 63337941 (-)
LOC110526320 dhso coding downstream 457352 63325814 ~ 63330232 (-)
LOC110526941 LOC106562155 coding downstream 546931 63235956 ~ 63240653 (-)
LOC110526314 LOC100196237 coding downstream 552301 63224573 ~ 63235283 (-)
igdcc3 LOC106562146 coding upstream 36101 63823887 ~ 63944930 (-)
igdcc4 LOC106587237 coding upstream 165247 63953033 ~ 64013404 (-)
LOC110526332 LOC106562143 coding upstream 261659 64049445 ~ 64084887 (-)
LOC110526336 LOC106562141 coding upstream 630078 64417864 ~ 64492865 (-)
LOC110526338 LOC106587230 coding upstream 721957 64509743 ~ 64642634 (-)
G533317 NA non-coding downstream 4310 63783063 ~ 63783274 (-)
G533309 NA non-coding downstream 8528 63778821 ~ 63779056 (-)
G533302 NA non-coding downstream 12936 63774414 ~ 63774648 (-)
G533299 NA non-coding downstream 28958 63758366 ~ 63758626 (-)
G533296 NA non-coding downstream 29587 63757751 ~ 63757997 (-)
G533338 NA non-coding upstream 7219 63795005 ~ 63795227 (-)
G533340 NA non-coding upstream 8011 63795797 ~ 63800824 (-)
G533477 NA non-coding upstream 31737 63819523 ~ 63819803 (-)
G533512 NA non-coding upstream 105691 63893477 ~ 63898023 (-)
LOC110526310 LOC106587159 other downstream 797306 62985486 ~ 62991995 (-)
G532766 NA other downstream 932577 62822905 ~ 62855007 (-)
G532763 NA other downstream 934767 62851696 ~ 62852817 (-)
LOC110526302 LOC106562167 other downstream 1229185 62500665 ~ 62566214 (-)
znf536 LOC106562015 other downstream 4090621 59507092 ~ 59698393 (-)
G534201 NA other upstream 710667 64498453 ~ 64499614 (-)
G534349 NA other upstream 791012 64578798 ~ 64614796 (-)
G534603 NA other upstream 1067709 64855495 ~ 64895099 (-)
LOC110526365 LOC106587205 other upstream 1836203 65600097 ~ 65765382 (-)

Expression


G533325 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
End of interactive chart.

G533325 Expression in each Bioproject

Bar chart with 20 bars.
G533325 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
End of interactive chart.

Co-expression Network