G533584


Basic Information

Item Value
gene id G533584
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 64046235 ~ 64046477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU604264
gtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgacttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcctacttgttgttgat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU604264 True 243 lncRNA 0.36 1 64046235 64046477

Neighbor

gene id symbol gene type direction distance location
LOC110526331 LOC106587235 coding upstream 13943 64026685 ~ 64032292 (+)
LOC110526326 eif3j coding upstream 283348 63758243 ~ 63762887 (+)
strc1 LOC106587240 coding upstream 288997 63730434 ~ 63757238 (+)
LOC110526325 ctdspl2 coding upstream 318405 63702297 ~ 63727830 (+)
golm2 casc4 coding upstream 347120 63684063 ~ 63699115 (+)
insyn1 LOC106587233 coding downstream 171697 64218174 ~ 64277755 (+)
LOC110526337 LOC106587231 coding downstream 448342 64494819 ~ 64499621 (+)
LOC110526343 LOC106587228 coding downstream 706552 64753029 ~ 64765798 (+)
LOC110526344 LOC106587225 coding downstream 722622 64769099 ~ 64781704 (+)
chrna5 LOC106587222 coding downstream 786147 64832624 ~ 64851098 (+)
G533410 NA non-coding upstream 44439 63938389 ~ 64001796 (+)
G533360 NA non-coding upstream 218506 63826855 ~ 63827729 (+)
G533359 NA non-coding upstream 221309 63823929 ~ 63824926 (+)
G533351 NA non-coding upstream 233326 63812702 ~ 63812909 (+)
G533339 NA non-coding upstream 245411 63795729 ~ 63800824 (+)
G533586 NA non-coding downstream 1974 64048451 ~ 64048682 (+)
G533668 NA non-coding downstream 66887 64113364 ~ 64113821 (+)
G533697 NA non-coding downstream 99144 64145621 ~ 64145854 (+)
G533701 NA non-coding downstream 101110 64147587 ~ 64147826 (+)
G533723 NA non-coding downstream 113535 64160012 ~ 64160231 (+)
G532489 NA other upstream 702480 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 706737 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 847501 63032931 ~ 63198734 (+)
LOC110526311 LOC106587159 other upstream 1031249 63005672 ~ 63068991 (+)
G532259 NA other upstream 1223619 62820420 ~ 62822616 (+)
G534453 NA other downstream 743845 64790322 ~ 64847104 (+)
G534653 NA other downstream 1066803 65113280 ~ 65169563 (+)
LOC110526356 LOC106587213 other downstream 1110032 65065380 ~ 65178884 (+)
G535150 LOC106587155 other downstream 1801146 65847623 ~ 65849441 (+)

Expression


Co-expression Network