G533747


Basic Information

Item Value
gene id G533747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 64183747 ~ 64183985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU604432
gtcagccaggggccgcccgagcagctgcccctctgtccagagcagctgtcgcccctctgtcccaagctgctgccgcccctctgtcccgagcagctgtccctctgtcccgagcagctgtccctctgtcccgagcagctgtccctctgtcccgagcagctgtccctctgtcccgagcagctgctatcgcccctctgtcccgagctgctatcgcccctctgtcccgagctgctatcgcccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU604432 True 239 lncRNA 0.69 1 64183747 64183985

Neighbor

gene id symbol gene type direction distance location
LOC110526331 LOC106587235 coding upstream 151455 64026685 ~ 64032292 (+)
LOC110526326 eif3j coding upstream 420860 63758243 ~ 63762887 (+)
strc1 LOC106587240 coding upstream 426509 63730434 ~ 63757238 (+)
LOC110526325 ctdspl2 coding upstream 455917 63702297 ~ 63727830 (+)
golm2 casc4 coding upstream 484632 63684063 ~ 63699115 (+)
insyn1 LOC106587233 coding downstream 34189 64218174 ~ 64277755 (+)
LOC110526337 LOC106587231 coding downstream 310834 64494819 ~ 64499621 (+)
LOC110526343 LOC106587228 coding downstream 569044 64753029 ~ 64765798 (+)
LOC110526344 LOC106587225 coding downstream 585114 64769099 ~ 64781704 (+)
chrna5 LOC106587222 coding downstream 648639 64832624 ~ 64851098 (+)
G533723 NA non-coding upstream 23516 64160012 ~ 64160231 (+)
G533701 NA non-coding upstream 35921 64147587 ~ 64147826 (+)
G533697 NA non-coding upstream 37893 64145621 ~ 64145854 (+)
G533668 NA non-coding upstream 69926 64113364 ~ 64113821 (+)
G533586 NA non-coding upstream 135065 64048451 ~ 64048682 (+)
G533748 NA non-coding downstream 1726 64185711 ~ 64185919 (+)
G533752 NA non-coding downstream 6805 64190790 ~ 64197078 (+)
G533761 NA non-coding downstream 23718 64207703 ~ 64207909 (+)
G533762 NA non-coding downstream 24157 64208142 ~ 64208400 (+)
G533766 NA non-coding downstream 26530 64210515 ~ 64211049 (+)
G532489 NA other upstream 839992 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 844249 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 985013 63032931 ~ 63198734 (+)
LOC110526311 LOC106587159 other upstream 1168761 63005672 ~ 63068991 (+)
G532259 NA other upstream 1361131 62820420 ~ 62822616 (+)
G534453 NA other downstream 606337 64790322 ~ 64847104 (+)
G534653 NA other downstream 929295 65113280 ~ 65169563 (+)
LOC110526356 LOC106587213 other downstream 972524 65065380 ~ 65178884 (+)
G535150 LOC106587155 other downstream 1663638 65847623 ~ 65849441 (+)

Expression


Co-expression Network