Gene
RNA
| Item | Value |
|---|---|
| gene id | G533752 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 64190790 ~ 64197078 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: putative proline-rich protein 21 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU604437 | True | 484 | lncRNA | 0.42 | 3 | 64190790 | 64197078 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526331 | LOC106587235 | coding | upstream | 158498 | 64026685 ~ 64032292 (+) |
| LOC110526326 | eif3j | coding | upstream | 427903 | 63758243 ~ 63762887 (+) |
| strc1 | LOC106587240 | coding | upstream | 433552 | 63730434 ~ 63757238 (+) |
| LOC110526325 | ctdspl2 | coding | upstream | 462960 | 63702297 ~ 63727830 (+) |
| golm2 | casc4 | coding | upstream | 491675 | 63684063 ~ 63699115 (+) |
| insyn1 | LOC106587233 | coding | downstream | 21096 | 64218174 ~ 64277755 (+) |
| LOC110526337 | LOC106587231 | coding | downstream | 297741 | 64494819 ~ 64499621 (+) |
| LOC110526343 | LOC106587228 | coding | downstream | 555951 | 64753029 ~ 64765798 (+) |
| LOC110526344 | LOC106587225 | coding | downstream | 572021 | 64769099 ~ 64781704 (+) |
| chrna5 | LOC106587222 | coding | downstream | 635546 | 64832624 ~ 64851098 (+) |
| G533748 | NA | non-coding | upstream | 4871 | 64185711 ~ 64185919 (+) |
| G533747 | NA | non-coding | upstream | 6805 | 64183747 ~ 64183985 (+) |
| G533723 | NA | non-coding | upstream | 30559 | 64160012 ~ 64160231 (+) |
| G533701 | NA | non-coding | upstream | 42964 | 64147587 ~ 64147826 (+) |
| G533697 | NA | non-coding | upstream | 44936 | 64145621 ~ 64145854 (+) |
| G533761 | NA | non-coding | downstream | 10625 | 64207703 ~ 64207909 (+) |
| G533762 | NA | non-coding | downstream | 11064 | 64208142 ~ 64208400 (+) |
| G533766 | NA | non-coding | downstream | 13437 | 64210515 ~ 64211049 (+) |
| G533864 | NA | non-coding | downstream | 155812 | 64352890 ~ 64353122 (+) |
| G532489 | NA | other | upstream | 847035 | 63308533 ~ 63343755 (+) |
| LOC100750227 | LOC106587244 | other | upstream | 851292 | 63338236 ~ 63549030 (+) |
| G532237 | LOC106591742 | other | upstream | 992056 | 63032931 ~ 63198734 (+) |
| LOC110526311 | LOC106587159 | other | upstream | 1175804 | 63005672 ~ 63068991 (+) |
| G532259 | NA | other | upstream | 1368174 | 62820420 ~ 62822616 (+) |
| G534453 | NA | other | downstream | 593244 | 64790322 ~ 64847104 (+) |
| G534653 | NA | other | downstream | 916202 | 65113280 ~ 65169563 (+) |
| LOC110526356 | LOC106587213 | other | downstream | 959431 | 65065380 ~ 65178884 (+) |
| G535150 | LOC106587155 | other | downstream | 1650545 | 65847623 ~ 65849441 (+) |
