G533762



Basic Information


Item Value
gene id G533762
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 64208142 ~ 64208400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU604447
GATTctaatatattgtgtgtgtgtgtgtgtgtttgtatgtgcgcATGTGGGAGTgcttgtttgtgtttgtttagGGAGCCCAGTAACATCCTGTCAGAGCACAGGTCAGGATGAcaaatctctcctctccatctacaGCCATGCATCTCCCTGCTGTTCAGTCATGGCCATGTTTCCAGTGCTGCTCTGACACCTGAGCAGCCAGAGCCTGTTAAACTGCCCTGGCCCCAAATGGAGTTCTCATTTTCAAGGAGAACGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU604447 True 259 lncRNA 0.49 1 64208142 64208400
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110526331 LOC106587235 coding upstream 175850 64026685 ~ 64032292 (+)
LOC110526326 eif3j coding upstream 445255 63758243 ~ 63762887 (+)
strc1 LOC106587240 coding upstream 450904 63730434 ~ 63757238 (+)
LOC110526325 ctdspl2 coding upstream 480312 63702297 ~ 63727830 (+)
golm2 casc4 coding upstream 509027 63684063 ~ 63699115 (+)
insyn1 LOC106587233 coding downstream 9774 64218174 ~ 64277755 (+)
LOC110526337 LOC106587231 coding downstream 286419 64494819 ~ 64499621 (+)
LOC110526343 LOC106587228 coding downstream 544629 64753029 ~ 64765798 (+)
LOC110526344 LOC106587225 coding downstream 560699 64769099 ~ 64781704 (+)
chrna5 LOC106587222 coding downstream 624224 64832624 ~ 64851098 (+)
G533761 NA non-coding upstream 233 64207703 ~ 64207909 (+)
G533752 NA non-coding upstream 11064 64190790 ~ 64197078 (+)
G533748 NA non-coding upstream 22223 64185711 ~ 64185919 (+)
G533747 NA non-coding upstream 24157 64183747 ~ 64183985 (+)
G533723 NA non-coding upstream 47911 64160012 ~ 64160231 (+)
G533766 NA non-coding downstream 2115 64210515 ~ 64211049 (+)
G533864 NA non-coding downstream 144490 64352890 ~ 64353122 (+)
G533889 NA non-coding downstream 184761 64393161 ~ 64393475 (+)
G533898 NA non-coding downstream 196530 64404930 ~ 64406861 (+)
G532489 NA other upstream 864387 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 868644 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 1009408 63032931 ~ 63198734 (+)
LOC110526311 LOC106587159 other upstream 1193156 63005672 ~ 63068991 (+)
G532259 NA other upstream 1385526 62820420 ~ 62822616 (+)
G534453 NA other downstream 581922 64790322 ~ 64847104 (+)
G534653 NA other downstream 904880 65113280 ~ 65169563 (+)
LOC110526356 LOC106587213 other downstream 948109 65065380 ~ 65178884 (+)
G535150 LOC106587155 other downstream 1639223 65847623 ~ 65849441 (+)

Expression


G533762 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G533762 Expression in each Bioproject

Bar chart with 7 bars.
G533762 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 12.
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Co-expression Network