Item | Value |
---|---|
gene id | G533762 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 64208142 ~ 64208400 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU604447 | True | 259 | lncRNA | 0.49 | 1 | 64208142 | 64208400 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110526331 | LOC106587235 | coding | upstream | 175850 | 64026685 ~ 64032292 (+) |
LOC110526326 | eif3j | coding | upstream | 445255 | 63758243 ~ 63762887 (+) |
strc1 | LOC106587240 | coding | upstream | 450904 | 63730434 ~ 63757238 (+) |
LOC110526325 | ctdspl2 | coding | upstream | 480312 | 63702297 ~ 63727830 (+) |
golm2 | casc4 | coding | upstream | 509027 | 63684063 ~ 63699115 (+) |
insyn1 | LOC106587233 | coding | downstream | 9774 | 64218174 ~ 64277755 (+) |
LOC110526337 | LOC106587231 | coding | downstream | 286419 | 64494819 ~ 64499621 (+) |
LOC110526343 | LOC106587228 | coding | downstream | 544629 | 64753029 ~ 64765798 (+) |
LOC110526344 | LOC106587225 | coding | downstream | 560699 | 64769099 ~ 64781704 (+) |
chrna5 | LOC106587222 | coding | downstream | 624224 | 64832624 ~ 64851098 (+) |
G533761 | NA | non-coding | upstream | 233 | 64207703 ~ 64207909 (+) |
G533752 | NA | non-coding | upstream | 11064 | 64190790 ~ 64197078 (+) |
G533748 | NA | non-coding | upstream | 22223 | 64185711 ~ 64185919 (+) |
G533747 | NA | non-coding | upstream | 24157 | 64183747 ~ 64183985 (+) |
G533723 | NA | non-coding | upstream | 47911 | 64160012 ~ 64160231 (+) |
G533766 | NA | non-coding | downstream | 2115 | 64210515 ~ 64211049 (+) |
G533864 | NA | non-coding | downstream | 144490 | 64352890 ~ 64353122 (+) |
G533889 | NA | non-coding | downstream | 184761 | 64393161 ~ 64393475 (+) |
G533898 | NA | non-coding | downstream | 196530 | 64404930 ~ 64406861 (+) |
G532489 | NA | other | upstream | 864387 | 63308533 ~ 63343755 (+) |
LOC100750227 | LOC106587244 | other | upstream | 868644 | 63338236 ~ 63549030 (+) |
G532237 | LOC106591742 | other | upstream | 1009408 | 63032931 ~ 63198734 (+) |
LOC110526311 | LOC106587159 | other | upstream | 1193156 | 63005672 ~ 63068991 (+) |
G532259 | NA | other | upstream | 1385526 | 62820420 ~ 62822616 (+) |
G534453 | NA | other | downstream | 581922 | 64790322 ~ 64847104 (+) |
G534653 | NA | other | downstream | 904880 | 65113280 ~ 65169563 (+) |
LOC110526356 | LOC106587213 | other | downstream | 948109 | 65065380 ~ 65178884 (+) |
G535150 | LOC106587155 | other | downstream | 1639223 | 65847623 ~ 65849441 (+) |