Gene
RNA
| Item | Value |
|---|---|
| gene id | G533898 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 64404930 ~ 64406861 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU604586 | False | 221 | lncRNA | 0.39 | 2 | 64404930 | 64406861 |
| TU604587 | True | 219 | lncRNA | 0.40 | 2 | 64404930 | 64406861 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| insyn1 | LOC106587233 | coding | upstream | 127175 | 64218174 ~ 64277755 (+) |
| LOC110526331 | LOC106587235 | coding | upstream | 372638 | 64026685 ~ 64032292 (+) |
| LOC110526326 | eif3j | coding | upstream | 642043 | 63758243 ~ 63762887 (+) |
| strc1 | LOC106587240 | coding | upstream | 647692 | 63730434 ~ 63757238 (+) |
| LOC110526325 | ctdspl2 | coding | upstream | 677100 | 63702297 ~ 63727830 (+) |
| LOC110526337 | LOC106587231 | coding | downstream | 87958 | 64494819 ~ 64499621 (+) |
| LOC110526343 | LOC106587228 | coding | downstream | 346168 | 64753029 ~ 64765798 (+) |
| LOC110526344 | LOC106587225 | coding | downstream | 362238 | 64769099 ~ 64781704 (+) |
| chrna5 | LOC106587222 | coding | downstream | 425763 | 64832624 ~ 64851098 (+) |
| LOC110526346 | NA | coding | downstream | 448115 | 64854976 ~ 64858185 (+) |
| G533889 | NA | non-coding | upstream | 11455 | 64393161 ~ 64393475 (+) |
| G533864 | NA | non-coding | upstream | 51808 | 64352890 ~ 64353122 (+) |
| G533766 | NA | non-coding | upstream | 193881 | 64210515 ~ 64211049 (+) |
| G533762 | NA | non-coding | upstream | 196530 | 64208142 ~ 64208400 (+) |
| G533903 | NA | non-coding | downstream | 8247 | 64415108 ~ 64415435 (+) |
| G533907 | NA | non-coding | downstream | 8857 | 64415718 ~ 64416829 (+) |
| G533953 | LOC100194703 | non-coding | downstream | 97245 | 64504106 ~ 64507098 (+) |
| G533991 | NA | non-coding | downstream | 147003 | 64553864 ~ 64573072 (+) |
| G534128 | NA | non-coding | downstream | 350969 | 64757830 ~ 64758115 (+) |
| G532489 | NA | other | upstream | 1061175 | 63308533 ~ 63343755 (+) |
| LOC100750227 | LOC106587244 | other | upstream | 1065432 | 63338236 ~ 63549030 (+) |
| G532237 | LOC106591742 | other | upstream | 1206196 | 63032931 ~ 63198734 (+) |
| LOC110526311 | LOC106587159 | other | upstream | 1389944 | 63005672 ~ 63068991 (+) |
| G532259 | NA | other | upstream | 1582314 | 62820420 ~ 62822616 (+) |
| G534453 | NA | other | downstream | 383461 | 64790322 ~ 64847104 (+) |
| G534653 | NA | other | downstream | 706419 | 65113280 ~ 65169563 (+) |
| LOC110526356 | LOC106587213 | other | downstream | 749648 | 65065380 ~ 65178884 (+) |
| G535150 | LOC106587155 | other | downstream | 1440762 | 65847623 ~ 65849441 (+) |
