Gene
RNA
| Item | Value |
|---|---|
| gene id | G533907 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 64415718 ~ 64416829 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU604597 | True | 1112 | lncRNA | 0.37 | 1 | 64415718 | 64416829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| insyn1 | LOC106587233 | coding | upstream | 137963 | 64218174 ~ 64277755 (+) |
| LOC110526331 | LOC106587235 | coding | upstream | 383426 | 64026685 ~ 64032292 (+) |
| LOC110526326 | eif3j | coding | upstream | 652831 | 63758243 ~ 63762887 (+) |
| strc1 | LOC106587240 | coding | upstream | 658480 | 63730434 ~ 63757238 (+) |
| LOC110526325 | ctdspl2 | coding | upstream | 687888 | 63702297 ~ 63727830 (+) |
| LOC110526337 | LOC106587231 | coding | downstream | 77990 | 64494819 ~ 64499621 (+) |
| LOC110526343 | LOC106587228 | coding | downstream | 336200 | 64753029 ~ 64765798 (+) |
| LOC110526344 | LOC106587225 | coding | downstream | 352270 | 64769099 ~ 64781704 (+) |
| chrna5 | LOC106587222 | coding | downstream | 415795 | 64832624 ~ 64851098 (+) |
| LOC110526346 | NA | coding | downstream | 438147 | 64854976 ~ 64858185 (+) |
| G533903 | NA | non-coding | upstream | 283 | 64415108 ~ 64415435 (+) |
| G533898 | NA | non-coding | upstream | 8857 | 64404930 ~ 64406861 (+) |
| G533889 | NA | non-coding | upstream | 22243 | 64393161 ~ 64393475 (+) |
| G533864 | NA | non-coding | upstream | 62596 | 64352890 ~ 64353122 (+) |
| G533953 | LOC100194703 | non-coding | downstream | 87277 | 64504106 ~ 64507098 (+) |
| G533991 | NA | non-coding | downstream | 137035 | 64553864 ~ 64573072 (+) |
| G534128 | NA | non-coding | downstream | 341001 | 64757830 ~ 64758115 (+) |
| G534130 | NA | non-coding | downstream | 343405 | 64760234 ~ 64760505 (+) |
| G532489 | NA | other | upstream | 1071963 | 63308533 ~ 63343755 (+) |
| LOC100750227 | LOC106587244 | other | upstream | 1076220 | 63338236 ~ 63549030 (+) |
| G532237 | LOC106591742 | other | upstream | 1216984 | 63032931 ~ 63198734 (+) |
| LOC110526311 | LOC106587159 | other | upstream | 1400732 | 63005672 ~ 63068991 (+) |
| G532259 | NA | other | upstream | 1593102 | 62820420 ~ 62822616 (+) |
| G534453 | NA | other | downstream | 373493 | 64790322 ~ 64847104 (+) |
| G534653 | NA | other | downstream | 696451 | 65113280 ~ 65169563 (+) |
| LOC110526356 | LOC106587213 | other | downstream | 739680 | 65065380 ~ 65178884 (+) |
| G535150 | LOC106587155 | other | downstream | 1430794 | 65847623 ~ 65849441 (+) |
