Item | Value |
---|---|
gene id | G533991 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 64553864 ~ 64573072 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU604685 | True | 293 | lncRNA | 0.45 | 2 | 64553864 | 64573072 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110526337 | LOC106587231 | coding | upstream | 54243 | 64494819 ~ 64499621 (+) |
insyn1 | LOC106587233 | coding | upstream | 276109 | 64218174 ~ 64277755 (+) |
LOC110526331 | LOC106587235 | coding | upstream | 521572 | 64026685 ~ 64032292 (+) |
LOC110526326 | eif3j | coding | upstream | 790977 | 63758243 ~ 63762887 (+) |
strc1 | LOC106587240 | coding | upstream | 796626 | 63730434 ~ 63757238 (+) |
LOC110526343 | LOC106587228 | coding | downstream | 179957 | 64753029 ~ 64765798 (+) |
LOC110526344 | LOC106587225 | coding | downstream | 196027 | 64769099 ~ 64781704 (+) |
chrna5 | LOC106587222 | coding | downstream | 259552 | 64832624 ~ 64851098 (+) |
LOC110526346 | NA | coding | downstream | 281904 | 64854976 ~ 64858185 (+) |
LOC118936302 | NA | coding | downstream | 308650 | 64881722 ~ 64884136 (+) |
G533953 | LOC100194703 | non-coding | upstream | 46766 | 64504106 ~ 64507098 (+) |
G533907 | NA | non-coding | upstream | 137035 | 64415718 ~ 64416829 (+) |
G533903 | NA | non-coding | upstream | 138429 | 64415108 ~ 64415435 (+) |
G533898 | NA | non-coding | upstream | 147003 | 64404930 ~ 64406861 (+) |
G533889 | NA | non-coding | upstream | 160389 | 64393161 ~ 64393475 (+) |
G534128 | NA | non-coding | downstream | 184758 | 64757830 ~ 64758115 (+) |
G534130 | NA | non-coding | downstream | 187162 | 64760234 ~ 64760505 (+) |
G534445 | NA | non-coding | downstream | 200575 | 64773647 ~ 64774014 (+) |
G532489 | NA | other | upstream | 1210109 | 63308533 ~ 63343755 (+) |
LOC100750227 | LOC106587244 | other | upstream | 1214366 | 63338236 ~ 63549030 (+) |
G532237 | LOC106591742 | other | upstream | 1355130 | 63032931 ~ 63198734 (+) |
LOC110526311 | LOC106587159 | other | upstream | 1538878 | 63005672 ~ 63068991 (+) |
G532259 | NA | other | upstream | 1731248 | 62820420 ~ 62822616 (+) |
G534453 | NA | other | downstream | 217250 | 64790322 ~ 64847104 (+) |
G534653 | NA | other | downstream | 540208 | 65113280 ~ 65169563 (+) |
LOC110526356 | LOC106587213 | other | downstream | 583437 | 65065380 ~ 65178884 (+) |
G535150 | LOC106587155 | other | downstream | 1274551 | 65847623 ~ 65849441 (+) |