G533991



Basic Information


Item Value
gene id G533991
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 64553864 ~ 64573072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU604685
CCCGCTCAGAGCTGCTTACTAACACATTCTTCTACCTGacgtctccctttctccctcactcatATTATCTCGTTCATTTATTTTCTTCGGGGGATGCAATGAATTCCATACTGGGTTTCTGGAGCAGTATGGAGCATGccatcaggcacacacacacaggtctaatGCAACCTTACTAAAAGGATATTTGGAAACCCGCTGCAGAATTGCAGGAAGTCAAACGTTGACTGGTGAGTTAAAAAATGTGACACGGTAATGTGAGAGTGCAGTATCACTTCTGAAACATAGAGCGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU604685 True 293 lncRNA 0.45 2 64553864 64573072
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110526337 LOC106587231 coding upstream 54243 64494819 ~ 64499621 (+)
insyn1 LOC106587233 coding upstream 276109 64218174 ~ 64277755 (+)
LOC110526331 LOC106587235 coding upstream 521572 64026685 ~ 64032292 (+)
LOC110526326 eif3j coding upstream 790977 63758243 ~ 63762887 (+)
strc1 LOC106587240 coding upstream 796626 63730434 ~ 63757238 (+)
LOC110526343 LOC106587228 coding downstream 179957 64753029 ~ 64765798 (+)
LOC110526344 LOC106587225 coding downstream 196027 64769099 ~ 64781704 (+)
chrna5 LOC106587222 coding downstream 259552 64832624 ~ 64851098 (+)
LOC110526346 NA coding downstream 281904 64854976 ~ 64858185 (+)
LOC118936302 NA coding downstream 308650 64881722 ~ 64884136 (+)
G533953 LOC100194703 non-coding upstream 46766 64504106 ~ 64507098 (+)
G533907 NA non-coding upstream 137035 64415718 ~ 64416829 (+)
G533903 NA non-coding upstream 138429 64415108 ~ 64415435 (+)
G533898 NA non-coding upstream 147003 64404930 ~ 64406861 (+)
G533889 NA non-coding upstream 160389 64393161 ~ 64393475 (+)
G534128 NA non-coding downstream 184758 64757830 ~ 64758115 (+)
G534130 NA non-coding downstream 187162 64760234 ~ 64760505 (+)
G534445 NA non-coding downstream 200575 64773647 ~ 64774014 (+)
G532489 NA other upstream 1210109 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 1214366 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 1355130 63032931 ~ 63198734 (+)
LOC110526311 LOC106587159 other upstream 1538878 63005672 ~ 63068991 (+)
G532259 NA other upstream 1731248 62820420 ~ 62822616 (+)
G534453 NA other downstream 217250 64790322 ~ 64847104 (+)
G534653 NA other downstream 540208 65113280 ~ 65169563 (+)
LOC110526356 LOC106587213 other downstream 583437 65065380 ~ 65178884 (+)
G535150 LOC106587155 other downstream 1274551 65847623 ~ 65849441 (+)

Expression


G533991 Expression in all Baseline Samples

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G533991 Expression in each Bioproject

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G533991 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 5.
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Co-expression Network