Gene
RNA
| Item | Value |
|---|---|
| gene id | G534445 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 64773647 ~ 64774014 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU605161 | True | 331 | lncRNA | 0.41 | 2 | 64773647 | 64774014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526343 | LOC106587228 | coding | upstream | 7849 | 64753029 ~ 64765798 (+) |
| LOC110526337 | LOC106587231 | coding | upstream | 274026 | 64494819 ~ 64499621 (+) |
| insyn1 | LOC106587233 | coding | upstream | 495892 | 64218174 ~ 64277755 (+) |
| LOC110526331 | LOC106587235 | coding | upstream | 741355 | 64026685 ~ 64032292 (+) |
| LOC110526326 | eif3j | coding | upstream | 1010760 | 63758243 ~ 63762887 (+) |
| chrna5 | LOC106587222 | coding | downstream | 58610 | 64832624 ~ 64851098 (+) |
| LOC110526346 | NA | coding | downstream | 80962 | 64854976 ~ 64858185 (+) |
| LOC118936302 | NA | coding | downstream | 107708 | 64881722 ~ 64884136 (+) |
| LOC110526348 | NA | coding | downstream | 117672 | 64891686 ~ 64895115 (+) |
| LOC110526349 | LOC106587217 | coding | downstream | 125787 | 64899801 ~ 64962147 (+) |
| G534130 | NA | non-coding | upstream | 13142 | 64760234 ~ 64760505 (+) |
| G534128 | NA | non-coding | upstream | 15532 | 64757830 ~ 64758115 (+) |
| G533991 | NA | non-coding | upstream | 200575 | 64553864 ~ 64573072 (+) |
| G533953 | LOC100194703 | non-coding | upstream | 266549 | 64504106 ~ 64507098 (+) |
| LOC110526344 | LOC106587225 | non-coding | downstream | 3367 | 64769099 ~ 64781704 (+) |
| G534449 | NA | non-coding | downstream | 11606 | 64785620 ~ 64804863 (+) |
| G534509 | NA | non-coding | downstream | 182516 | 64956530 ~ 64957769 (+) |
| G534510 | NA | non-coding | downstream | 188425 | 64962439 ~ 64964242 (+) |
| G534530 | NA | non-coding | downstream | 190288 | 64964302 ~ 64964542 (+) |
| G532489 | NA | other | upstream | 1429892 | 63308533 ~ 63343755 (+) |
| LOC100750227 | LOC106587244 | other | upstream | 1434149 | 63338236 ~ 63549030 (+) |
| G532237 | LOC106591742 | other | upstream | 1574913 | 63032931 ~ 63198734 (+) |
| LOC110526311 | LOC106587159 | other | upstream | 1758661 | 63005672 ~ 63068991 (+) |
| G532259 | NA | other | upstream | 1951031 | 62820420 ~ 62822616 (+) |
| G534453 | NA | other | downstream | 16308 | 64790322 ~ 64847104 (+) |
| G534653 | NA | other | downstream | 339266 | 65113280 ~ 65169563 (+) |
| LOC110526356 | LOC106587213 | other | downstream | 382495 | 65065380 ~ 65178884 (+) |
| G535150 | LOC106587155 | other | downstream | 1073609 | 65847623 ~ 65849441 (+) |
| G536406 | NA | other | downstream | 1828771 | 66602785 ~ 66604053 (+) |
