G534453


Basic Information

Item Value
gene id G534453
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 64790322 ~ 64847104 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU605171
catttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaactttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagacgttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtctgtcaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataattttgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttaagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgaatattgcacaaatctggcctttatggaagagtagcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacatgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatgga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU605171 True 968 TUCP 0.42 2 64790322 64847104

Neighbor

gene id symbol gene type direction distance location
LOC110526344 LOC106587225 coding upstream 8618 64769099 ~ 64781704 (+)
LOC110526343 LOC106587228 coding upstream 24524 64753029 ~ 64765798 (+)
LOC110526337 LOC106587231 coding upstream 290701 64494819 ~ 64499621 (+)
insyn1 LOC106587233 coding upstream 512567 64218174 ~ 64277755 (+)
LOC110526331 LOC106587235 coding upstream 758030 64026685 ~ 64032292 (+)
LOC110526346 NA coding downstream 7872 64854976 ~ 64858185 (+)
LOC118936302 NA coding downstream 34618 64881722 ~ 64884136 (+)
LOC110526348 NA coding downstream 44582 64891686 ~ 64895115 (+)
LOC110526349 LOC106587217 coding downstream 52697 64899801 ~ 64962147 (+)
LOC110526353 dhdh coding downstream 256120 65103224 ~ 65106320 (+)
G534445 NA non-coding upstream 16308 64773647 ~ 64774014 (+)
G534130 NA non-coding upstream 29817 64760234 ~ 64760505 (+)
G534128 NA non-coding upstream 32207 64757830 ~ 64758115 (+)
G534509 NA non-coding downstream 109426 64956530 ~ 64957769 (+)
G534510 NA non-coding downstream 115335 64962439 ~ 64964242 (+)
G534530 NA non-coding downstream 117198 64964302 ~ 64964542 (+)
G534532 NA non-coding downstream 120693 64967797 ~ 64968004 (+)
LOC110526356 LOC106587213 non-coding downstream 218276 65065380 ~ 65178884 (+)
G532489 NA other upstream 1446567 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 1450824 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 1591588 63032931 ~ 63198734 (+)
LOC110526311 LOC106587159 other upstream 1775336 63005672 ~ 63068991 (+)
G534653 NA other downstream 266176 65113280 ~ 65169563 (+)
G535150 LOC106587155 other downstream 1000519 65847623 ~ 65849441 (+)
G536406 NA other downstream 1755681 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 2166116 67013220 ~ 67018653 (+)

Expression


Co-expression Network