G534764


Basic Information

Item Value
gene id G534764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65173475 ~ 65173701 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU605537
GGGATTGTATCAACTCGCcacccaaggcttttacttgccacatatagttaaatgcactaaagaggaacaatgtGTACATATTGAAGATGCACATGCTCACCCCCAGAATCTTTTCACATGTCTATTTTCCaaggataaagctaagaacattaacaacttcatagttaagaacactataatGATATGGAAGAAAATTAAACATTTCacaagaaccaatatcactcccT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU605537 True 227 lncRNA 0.36 1 65173475 65173701

Neighbor

gene id symbol gene type direction distance location
dhdh.2 LOC106587215 coding upstream 60404 65106709 ~ 65113071 (+)
LOC110526353 dhdh coding upstream 67155 65103224 ~ 65106320 (+)
LOC110526349 LOC106587217 coding upstream 211328 64899801 ~ 64962147 (+)
LOC110526348 NA coding upstream 278360 64891686 ~ 64895115 (+)
LOC118936302 NA coding upstream 289339 64881722 ~ 64884136 (+)
LOC110526357 LOC106587212 coding downstream 19958 65193659 ~ 65368577 (+)
LOC110526358 LOC106587209 coding downstream 229907 65403608 ~ 65407275 (+)
LOC110526359 LOC106587211 coding downstream 240588 65414289 ~ 65430400 (+)
LOC110526360 LOC106587210 coding downstream 260710 65434411 ~ 65440976 (+)
LOC110526363 LOC106587208 coding downstream 267391 65441092 ~ 65521598 (+)
G534653 NA non-coding upstream 3912 65113280 ~ 65169563 (+)
LOC110526356 LOC106587213 non-coding upstream 12145 65065380 ~ 65178884 (+)
G534532 NA non-coding upstream 205471 64967797 ~ 64968004 (+)
G534530 NA non-coding upstream 208933 64964302 ~ 64964542 (+)
G534510 NA non-coding upstream 209233 64962439 ~ 64964242 (+)
G534767 NA non-coding downstream 5762 65179463 ~ 65179673 (+)
G534768 NA non-coding downstream 6582 65180283 ~ 65180487 (+)
G534769 NA non-coding downstream 6810 65180511 ~ 65180847 (+)
G534770 NA non-coding downstream 9314 65183015 ~ 65183379 (+)
G534771 NA non-coding downstream 11065 65184766 ~ 65184976 (+)
G534453 NA other upstream 326371 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 397139 64769099 ~ 64781704 (+)
G532489 NA other upstream 1829720 63308533 ~ 63343755 (+)
G535150 LOC106587155 other downstream 673922 65847623 ~ 65849441 (+)
G536406 NA other downstream 1429084 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1839519 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1930605 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1935975 67109676 ~ 67110628 (+)

Expression


Co-expression Network