G534771


Basic Information

Item Value
gene id G534771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65184766 ~ 65184976 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU605544
aaaaaaggccatggtggcaaggtaaatacaatatagcaagtaaaacactggaatggtagttttgcaatggaagaatgtgcaaagtagaaataaaaataatggggtgcaaaggagcaaaataaataaattaatgaaatacagttgggaaagaggtagttgtttgggctaaattataggtgggctatgtacaggtgcagtaatctgtgagctg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU605544 True 211 lncRNA 0.36 1 65184766 65184976

Neighbor

gene id symbol gene type direction distance location
LOC110526356 LOC106587213 coding upstream 5882 65065380 ~ 65178884 (+)
dhdh.2 LOC106587215 coding upstream 71695 65106709 ~ 65113071 (+)
LOC110526353 dhdh coding upstream 78446 65103224 ~ 65106320 (+)
LOC110526349 LOC106587217 coding upstream 222619 64899801 ~ 64962147 (+)
LOC110526348 NA coding upstream 289651 64891686 ~ 64895115 (+)
LOC110526357 LOC106587212 coding downstream 8683 65193659 ~ 65368577 (+)
LOC110526358 LOC106587209 coding downstream 218632 65403608 ~ 65407275 (+)
LOC110526359 LOC106587211 coding downstream 229313 65414289 ~ 65430400 (+)
LOC110526360 LOC106587210 coding downstream 249435 65434411 ~ 65440976 (+)
LOC110526363 LOC106587208 coding downstream 256116 65441092 ~ 65521598 (+)
G534770 NA non-coding upstream 1387 65183015 ~ 65183379 (+)
G534769 NA non-coding upstream 3919 65180511 ~ 65180847 (+)
G534768 NA non-coding upstream 4279 65180283 ~ 65180487 (+)
G534767 NA non-coding upstream 5093 65179463 ~ 65179673 (+)
G534764 NA non-coding upstream 11065 65173475 ~ 65173701 (+)
G534798 NA non-coding downstream 43128 65228104 ~ 65228825 (+)
G534799 NA non-coding downstream 44450 65229426 ~ 65230657 (+)
G534866 NA non-coding downstream 185040 65370016 ~ 65370283 (+)
G534870 NA non-coding downstream 190595 65375571 ~ 65376381 (+)
G534653 NA other upstream 66810 65113280 ~ 65169563 (+)
G534453 NA other upstream 337662 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 408430 64769099 ~ 64781704 (+)
LOC100750227 LOC106587244 other upstream 1845268 63338236 ~ 63549030 (+)
G535150 LOC106587155 other downstream 662647 65847623 ~ 65849441 (+)
G536406 NA other downstream 1417809 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1828244 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1919330 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1924700 67109676 ~ 67110628 (+)

Expression


Co-expression Network