G534799


Basic Information

Item Value
gene id G534799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65229426 ~ 65230657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU605578
tgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacatacactcatacacacatacacacacactacattgtcAGATCAATATTGCATTACGGTAGTGTGTTCTCCTGAGGGGGTACAGTGATAGGTGTGAGTGACGGTGAACCCTGGCTGTCTCTCCACTAGATCTAACCAAGGCACCAATCTGAGATGATTCCTCAGTAGTGACAGCCACCTCCTagctgtcacaccctggccttccACTTCCTCTCCCAGCCCCATAAACATTTACAGTATATACTTCTAACCCATCCACCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU605578 True 319 lncRNA 0.49 2 65229426 65230657

Neighbor

gene id symbol gene type direction distance location
LOC110526356 LOC106587213 coding upstream 50542 65065380 ~ 65178884 (+)
dhdh.2 LOC106587215 coding upstream 116355 65106709 ~ 65113071 (+)
LOC110526353 dhdh coding upstream 123106 65103224 ~ 65106320 (+)
LOC110526349 LOC106587217 coding upstream 267279 64899801 ~ 64962147 (+)
LOC110526348 NA coding upstream 334311 64891686 ~ 64895115 (+)
LOC110526358 LOC106587209 coding downstream 172951 65403608 ~ 65407275 (+)
LOC110526359 LOC106587211 coding downstream 183632 65414289 ~ 65430400 (+)
LOC110526360 LOC106587210 coding downstream 203754 65434411 ~ 65440976 (+)
LOC110526363 LOC106587208 coding downstream 210435 65441092 ~ 65521598 (+)
LOC110526364 LOC106587206 coding downstream 344412 65575069 ~ 65580465 (+)
G534798 NA non-coding upstream 601 65228104 ~ 65228825 (+)
G534771 NA non-coding upstream 44450 65184766 ~ 65184976 (+)
G534770 NA non-coding upstream 46047 65183015 ~ 65183379 (+)
G534769 NA non-coding upstream 48579 65180511 ~ 65180847 (+)
G534768 NA non-coding upstream 48939 65180283 ~ 65180487 (+)
LOC110526357 LOC106587212 non-coding downstream 132015 65193659 ~ 65368577 (+)
G534866 NA non-coding downstream 139359 65370016 ~ 65370283 (+)
G534870 NA non-coding downstream 144914 65375571 ~ 65376381 (+)
G534894 NA non-coding downstream 181715 65412372 ~ 65412985 (+)
G534653 NA other upstream 111470 65113280 ~ 65169563 (+)
G534453 NA other upstream 382322 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 453090 64769099 ~ 64781704 (+)
LOC100750227 LOC106587244 other upstream 1889928 63338236 ~ 63549030 (+)
G535150 LOC106587155 other downstream 616966 65847623 ~ 65849441 (+)
G536406 NA other downstream 1372128 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1782563 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1873649 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1879019 67109676 ~ 67110628 (+)

Expression


Co-expression Network