G534894



Basic Information


Item Value
gene id G534894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65412372 ~ 65412985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU605681
tagctaggctaggagttagggttagagttaaggttagctaacataTTAAGTAGATGCAAAgtaaactcggcaaaaaaagaaacgtcctctcactgtcaactgcgtttattttcaacatgtgtaaatatttgtatgaacataacaagattcaacaactgagacataaactgaacaagttccacagacatatgactaacagaaattgaataatgtgtccctgaacaaaaatcctaagtaacagtcagtatctggtgtggccaccagctgcattaagtactgcagtgcatctcctcctcaaggactgcaccagatttgccagttcttgctgtgagaactgttccactcttccaccaaggcacctgcaagtgggggaaatggccctagccctcaccctccaatccaacaggtcccagacgtgctcaatgggattgagatccgggcttgtcactggccatggcagaacgctgacatccctgtcttgcaggaaatcacgcacagaacgagcagtatggctggtggcattgtcatgctggagggtcatgtcaggatgagcctgcaggaagggtaccacatgagggaggaggatgtcttctctgtaacgcacagcattgaga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU605681 True 614 lncRNA 0.47 1 65412372 65412985

Neighbor


gene id symbol gene type direction distance location
LOC110526358 LOC106587209 coding upstream 5097 65403608 ~ 65407275 (+)
LOC110526357 LOC106587212 coding upstream 43795 65193659 ~ 65368577 (+)
LOC110526356 LOC106587213 coding upstream 233488 65065380 ~ 65178884 (+)
dhdh.2 LOC106587215 coding upstream 299301 65106709 ~ 65113071 (+)
LOC110526353 dhdh coding upstream 306052 65103224 ~ 65106320 (+)
LOC110526359 LOC106587211 coding downstream 1304 65414289 ~ 65430400 (+)
LOC110526360 LOC106587210 coding downstream 21426 65434411 ~ 65440976 (+)
LOC110526363 LOC106587208 coding downstream 28107 65441092 ~ 65521598 (+)
LOC110526364 LOC106587206 coding downstream 162084 65575069 ~ 65580465 (+)
LOC110526366 LOC106587204 coding downstream 355798 65768783 ~ 65771390 (+)
G534870 NA non-coding upstream 35991 65375571 ~ 65376381 (+)
G534866 NA non-coding upstream 42089 65370016 ~ 65370283 (+)
G534799 NA non-coding upstream 181715 65229426 ~ 65230657 (+)
G534798 NA non-coding upstream 183547 65228104 ~ 65228825 (+)
G534920 NA non-coding downstream 36507 65449492 ~ 65449693 (+)
G534921 NA non-coding downstream 36790 65449775 ~ 65450022 (+)
G534982 NA non-coding downstream 171287 65584272 ~ 65584519 (+)
G534984 NA non-coding downstream 173210 65586195 ~ 65586907 (+)
G534653 NA other upstream 294416 65113280 ~ 65169563 (+)
G534453 NA other upstream 565268 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 636036 64769099 ~ 64781704 (+)
LOC100750227 LOC106587244 other upstream 2072874 63338236 ~ 63549030 (+)
G535150 LOC106587155 other downstream 434638 65847623 ~ 65849441 (+)
G536406 NA other downstream 1189800 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1600235 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1691321 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1696691 67109676 ~ 67110628 (+)

Expression



Co-expression Network