Gene
RNA
| Item | Value |
|---|---|
| gene id | G535604 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 65414573 ~ 65430407 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Cytochrome c oxidase subunit 5A, mitochondrial precursor |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU606448 | True | 577 | lncRNA | 0.49 | 5 | 65414573 | 65430407 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526352 | LOC106587214 | coding | downstream | 280748 | 65113278 ~ 65133825 (-) |
| LOC110526350 | LOC106562128 | coding | downstream | 440806 | 64958215 ~ 64973767 (-) |
| LOC118965085 | LOC106587172 | coding | downstream | 516025 | 64897435 ~ 64898548 (-) |
| LOC110526341 | LOC106562136 | coding | downstream | 699459 | 64697204 ~ 64715114 (-) |
| LOC110526338 | LOC106587230 | coding | downstream | 771939 | 64509743 ~ 64642634 (-) |
| LOC110526361 | LOC106587207 | coding | upstream | 95265 | 65525672 ~ 65546448 (-) |
| LOC110526365 | LOC106587205 | coding | upstream | 169690 | 65600097 ~ 65765382 (-) |
| LOC110526369 | xlkd1 | coding | upstream | 362412 | 65792819 ~ 65795668 (-) |
| LOC110526367 | LOC106587202 | coding | upstream | 367666 | 65798073 ~ 65820337 (-) |
| LOC110526945 | LOC106562099 | coding | upstream | 396522 | 65826929 ~ 65828077 (-) |
| G535663 | NA | non-coding | downstream | 21815 | 65392537 ~ 65392758 (-) |
| G535654 | NA | non-coding | downstream | 39795 | 65374525 ~ 65374778 (-) |
| G535653 | NA | non-coding | downstream | 41293 | 65373014 ~ 65373280 (-) |
| G535603 | NA | non-coding | downstream | 46008 | 65361005 ~ 65368565 (-) |
| G535600 | NA | non-coding | downstream | 76951 | 65290125 ~ 65337622 (-) |
| G535693 | NA | non-coding | upstream | 10144 | 65440551 ~ 65440709 (-) |
| G535695 | LOC106587208 | non-coding | upstream | 13094 | 65443501 ~ 65444112 (-) |
| G535703 | NA | non-coding | upstream | 29369 | 65459776 ~ 65460005 (-) |
| G535713 | NA | non-coding | upstream | 39398 | 65469805 ~ 65470008 (-) |
| G535731 | NA | non-coding | upstream | 60684 | 65491091 ~ 65529060 (-) |
| G534603 | NA | other | downstream | 529041 | 64855495 ~ 64895099 (-) |
| G534349 | NA | other | downstream | 799777 | 64578798 ~ 64614796 (-) |
| G534201 | NA | other | downstream | 914959 | 64498453 ~ 64499614 (-) |
| igdcc3 | LOC106562146 | other | downstream | 1589048 | 63823887 ~ 63944930 (-) |
| LOC110526310 | LOC106587159 | other | downstream | 2424295 | 62985486 ~ 62991995 (-) |
| G536183 | NA | other | upstream | 832079 | 66262486 ~ 66276289 (-) |
| LOC110526379 | LOC106587193 | other | upstream | 846795 | 66277162 ~ 66326558 (-) |
| LOC110526387 | LOC106587187 | other | upstream | 1069981 | 66499996 ~ 66505055 (-) |
| G536630 | LOC106562092 | other | upstream | 1118960 | 66549367 ~ 66549974 (-) |
