G534982


Basic Information

Item Value
gene id G534982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65584272 ~ 65584519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU605773
gcagtggctcgggtggttgttgtccttgatgatcattatagccttcctgtgacatcgggtggtgtaggtgttctggagggcaggtagtttgcccctggtgatgcgttgtgcagacctcactaccctctggagagccttacggttgtgggcggagcagttgccgaaccaggcggtgatacagcccgacaggatgctctcgattgtgcatctgtagaagtttgtgagcgcttttggtgacaagccaaatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU605773 True 248 lncRNA 0.54 1 65584272 65584519

Neighbor

gene id symbol gene type direction distance location
LOC110526364 LOC106587206 coding upstream 3807 65575069 ~ 65580465 (+)
LOC110526363 LOC106587208 coding upstream 62674 65441092 ~ 65521598 (+)
LOC110526360 LOC106587210 coding upstream 143374 65434411 ~ 65440976 (+)
LOC110526359 LOC106587211 coding upstream 153872 65414289 ~ 65430400 (+)
LOC110526358 LOC106587209 coding upstream 176997 65403608 ~ 65407275 (+)
LOC110526366 LOC106587204 coding downstream 184264 65768783 ~ 65771390 (+)
LOC110526368 LOC106587203 coding downstream 190268 65774787 ~ 65792680 (+)
LOC110526370 LOC106562103 coding downstream 249240 65833759 ~ 65843569 (+)
LOC110526373 LOC106587200 coding downstream 363900 65948419 ~ 66035381 (+)
LOC110526374 LOC100196685 coding downstream 500600 66085119 ~ 66098315 (+)
G534921 NA non-coding upstream 134250 65449775 ~ 65450022 (+)
G534920 NA non-coding upstream 134579 65449492 ~ 65449693 (+)
G534894 NA non-coding upstream 171287 65412372 ~ 65412985 (+)
G534870 NA non-coding upstream 207891 65375571 ~ 65376381 (+)
G534984 NA non-coding downstream 1676 65586195 ~ 65586907 (+)
G535020 NA non-coding downstream 51139 65635658 ~ 65642430 (+)
G535118 NA non-coding downstream 211515 65796034 ~ 65797422 (+)
G535155 NA non-coding downstream 239850 65824369 ~ 65824684 (+)
G535156 NA non-coding downstream 240478 65824997 ~ 65825435 (+)
LOC110526356 LOC106587213 other upstream 422942 65065380 ~ 65178884 (+)
G534653 NA other upstream 466316 65113280 ~ 65169563 (+)
G534453 NA other upstream 737168 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 807936 64769099 ~ 64781704 (+)
LOC100750227 LOC106587244 other upstream 2244774 63338236 ~ 63549030 (+)
G535150 LOC106587155 other downstream 263104 65847623 ~ 65849441 (+)
G536406 NA other downstream 1018266 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1428701 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1519787 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1525157 67109676 ~ 67110628 (+)

Expression


Co-expression Network