Gene
RNA
| Item | Value |
|---|---|
| gene id | G535158 |
| gene name | LOC106562099 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 65827377 ~ 65827923 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| golgin subfamily A member 6-like protein 22 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU605967 | True | 547 | lncRNA | 0.56 | 1 | 65827377 | 65827923 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526368 | LOC106587203 | coding | upstream | 34697 | 65774787 ~ 65792680 (+) |
| LOC110526366 | LOC106587204 | coding | upstream | 55987 | 65768783 ~ 65771390 (+) |
| LOC110526364 | LOC106587206 | coding | upstream | 246912 | 65575069 ~ 65580465 (+) |
| LOC110526363 | LOC106587208 | coding | upstream | 305779 | 65441092 ~ 65521598 (+) |
| LOC110526360 | LOC106587210 | coding | upstream | 386479 | 65434411 ~ 65440976 (+) |
| LOC110526370 | LOC106562103 | coding | downstream | 5836 | 65833759 ~ 65843569 (+) |
| LOC110526373 | LOC106587200 | coding | downstream | 120496 | 65948419 ~ 66035381 (+) |
| LOC110526374 | LOC100196685 | coding | downstream | 257196 | 66085119 ~ 66098315 (+) |
| dkk3a | LOC106562112 | coding | downstream | 499808 | 66327731 ~ 66332554 (+) |
| pkd1l2a | LOC106587186 | coding | downstream | 632800 | 66460723 ~ 66500000 (+) |
| G535156 | NA | non-coding | upstream | 1942 | 65824997 ~ 65825435 (+) |
| G535155 | NA | non-coding | upstream | 2693 | 65824369 ~ 65824684 (+) |
| G535118 | NA | non-coding | upstream | 29955 | 65796034 ~ 65797422 (+) |
| G535020 | NA | non-coding | upstream | 184947 | 65635658 ~ 65642430 (+) |
| G534984 | NA | non-coding | upstream | 240470 | 65586195 ~ 65586907 (+) |
| G535162 | NA | non-coding | downstream | 3112 | 65831035 ~ 65831237 (+) |
| G535166 | NA | non-coding | downstream | 15926 | 65843849 ~ 65844347 (+) |
| G535151 | NA | non-coding | downstream | 17049 | 65844972 ~ 65846257 (+) |
| G535176 | NA | non-coding | downstream | 48745 | 65876668 ~ 65876921 (+) |
| G535177 | NA | non-coding | downstream | 49020 | 65876943 ~ 65877244 (+) |
| LOC110526356 | LOC106587213 | other | upstream | 666047 | 65065380 ~ 65178884 (+) |
| G534653 | NA | other | upstream | 709421 | 65113280 ~ 65169563 (+) |
| G534453 | NA | other | upstream | 980273 | 64790322 ~ 64847104 (+) |
| LOC110526344 | LOC106587225 | other | upstream | 1051041 | 64769099 ~ 64781704 (+) |
| LOC100750227 | LOC106587244 | other | upstream | 2487879 | 63338236 ~ 63549030 (+) |
| G535150 | LOC106587155 | other | downstream | 19700 | 65847623 ~ 65849441 (+) |
| G536406 | NA | other | downstream | 774862 | 66602785 ~ 66604053 (+) |
| G536995 | zfhx3 | other | downstream | 1185297 | 67013220 ~ 67018653 (+) |
| G537029 | zfhx3 | other | downstream | 1276383 | 67104306 ~ 67104908 (+) |
| G537032 | LOC106587324 | other | downstream | 1281753 | 67109676 ~ 67110628 (+) |
