G535162


Basic Information

Item Value
gene id G535162
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65831035 ~ 65831237 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU605971
ATTGCACAGTGAGTGAATTACACTGATATCTGAGACAGATTCCCAGGCTGCCTACAAAAGCAAAACCTTACCATTTATAGACACTTTACAAGGGTTTTCCCCTGAAATATGTTTGTCGTCCTCATGCATGCTGAAAGATACAAACAATCATTAGTCTCCAGTTATAGATACAAAGCGGATTAGCAGGTTAACCAATGTTATAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU605971 True 203 lncRNA 0.38 1 65831035 65831237

Neighbor

gene id symbol gene type direction distance location
LOC110526368 LOC106587203 coding upstream 38355 65774787 ~ 65792680 (+)
LOC110526366 LOC106587204 coding upstream 59645 65768783 ~ 65771390 (+)
LOC110526364 LOC106587206 coding upstream 250570 65575069 ~ 65580465 (+)
LOC110526363 LOC106587208 coding upstream 309437 65441092 ~ 65521598 (+)
LOC110526360 LOC106587210 coding upstream 390137 65434411 ~ 65440976 (+)
LOC110526370 LOC106562103 coding downstream 2522 65833759 ~ 65843569 (+)
LOC110526373 LOC106587200 coding downstream 117182 65948419 ~ 66035381 (+)
LOC110526374 LOC100196685 coding downstream 253882 66085119 ~ 66098315 (+)
dkk3a LOC106562112 coding downstream 496494 66327731 ~ 66332554 (+)
pkd1l2a LOC106587186 coding downstream 629486 66460723 ~ 66500000 (+)
G535158 LOC106562099 non-coding upstream 3112 65827377 ~ 65827923 (+)
G535156 NA non-coding upstream 5600 65824997 ~ 65825435 (+)
G535155 NA non-coding upstream 6351 65824369 ~ 65824684 (+)
G535118 NA non-coding upstream 33613 65796034 ~ 65797422 (+)
G535020 NA non-coding upstream 188605 65635658 ~ 65642430 (+)
G535166 NA non-coding downstream 12612 65843849 ~ 65844347 (+)
G535151 NA non-coding downstream 13735 65844972 ~ 65846257 (+)
G535176 NA non-coding downstream 45431 65876668 ~ 65876921 (+)
G535177 NA non-coding downstream 45706 65876943 ~ 65877244 (+)
G535182 NA non-coding downstream 51489 65882726 ~ 65883012 (+)
LOC110526356 LOC106587213 other upstream 669705 65065380 ~ 65178884 (+)
G534653 NA other upstream 713079 65113280 ~ 65169563 (+)
G534453 NA other upstream 983931 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 1054699 64769099 ~ 64781704 (+)
LOC100750227 LOC106587244 other upstream 2491537 63338236 ~ 63549030 (+)
G535150 LOC106587155 other downstream 16386 65847623 ~ 65849441 (+)
G536406 NA other downstream 771548 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1181983 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1273069 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1278439 67109676 ~ 67110628 (+)

Expression


Co-expression Network