Item | Value |
---|---|
gene id | G535151 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 65844972 ~ 65846257 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU605960 | True | 1160 | lncRNA | 0.36 | 3 | 65844972 | 65846257 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110526370 | LOC106562103 | coding | upstream | 1403 | 65833759 ~ 65843569 (+) |
LOC110526368 | LOC106587203 | coding | upstream | 52292 | 65774787 ~ 65792680 (+) |
LOC110526366 | LOC106587204 | coding | upstream | 73582 | 65768783 ~ 65771390 (+) |
LOC110526364 | LOC106587206 | coding | upstream | 264507 | 65575069 ~ 65580465 (+) |
LOC110526363 | LOC106587208 | coding | upstream | 323374 | 65441092 ~ 65521598 (+) |
LOC110526373 | LOC106587200 | coding | downstream | 102162 | 65948419 ~ 66035381 (+) |
LOC110526374 | LOC100196685 | coding | downstream | 238862 | 66085119 ~ 66098315 (+) |
dkk3a | LOC106562112 | coding | downstream | 481474 | 66327731 ~ 66332554 (+) |
pkd1l2a | LOC106587186 | coding | downstream | 614466 | 66460723 ~ 66500000 (+) |
LOC110526388 | LOC106587185 | coding | downstream | 660654 | 66506911 ~ 66565353 (+) |
G535166 | NA | non-coding | upstream | 625 | 65843849 ~ 65844347 (+) |
G535162 | NA | non-coding | upstream | 13735 | 65831035 ~ 65831237 (+) |
G535158 | LOC106562099 | non-coding | upstream | 17049 | 65827377 ~ 65827923 (+) |
G535156 | NA | non-coding | upstream | 19537 | 65824997 ~ 65825435 (+) |
G535155 | NA | non-coding | upstream | 20288 | 65824369 ~ 65824684 (+) |
G535176 | NA | non-coding | downstream | 30411 | 65876668 ~ 65876921 (+) |
G535177 | NA | non-coding | downstream | 30686 | 65876943 ~ 65877244 (+) |
G535182 | NA | non-coding | downstream | 36469 | 65882726 ~ 65883012 (+) |
G535194 | NA | non-coding | downstream | 51252 | 65897509 ~ 65930401 (+) |
G535358 | NA | non-coding | downstream | 300328 | 66146585 ~ 66146855 (+) |
LOC110526356 | LOC106587213 | other | upstream | 683642 | 65065380 ~ 65178884 (+) |
G534653 | NA | other | upstream | 727016 | 65113280 ~ 65169563 (+) |
G534453 | NA | other | upstream | 997868 | 64790322 ~ 64847104 (+) |
LOC110526344 | LOC106587225 | other | upstream | 1068636 | 64769099 ~ 64781704 (+) |
LOC100750227 | LOC106587244 | other | upstream | 2505474 | 63338236 ~ 63549030 (+) |
G535150 | LOC106587155 | other | downstream | 1366 | 65847623 ~ 65849441 (+) |
G536406 | NA | other | downstream | 756528 | 66602785 ~ 66604053 (+) |
G536995 | zfhx3 | other | downstream | 1166963 | 67013220 ~ 67018653 (+) |
G537029 | zfhx3 | other | downstream | 1258049 | 67104306 ~ 67104908 (+) |
G537032 | LOC106587324 | other | downstream | 1263419 | 67109676 ~ 67110628 (+) |