G535150 (LOC106587155)


Basic Information

Item Value
gene id G535150
gene name LOC106587155
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65847623 ~ 65849441 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU605959
TGAAGCTCTCCCCAGTAACAAGGCCCTCTGTGCGGAGTGTGTGGATCAAGGTGCTGGCATGCTCCTTGTCTTCATCTGGGCAGTCAAGAGAACAGATCACGATCTTGCTCAACATCTCAGGCAGGAAGTGTTTGGGAGCCTTCATCTCTCTTACACAGTTCACAGCTTCATCAATGTTTTTGCTGTTCAGGTAATCGGTCACTATGGTCTCGGTCATCTTAAGCAACTCTTCCTTTGCAGGAGGCGGTTTCTTGGTGGTCTTTGGAGGTTTTTCCTGAATTGGAGGAGGGTTGGTTTTCAGACCAAGCAGAGGAGGCTGTCCCAGTGGTGGTGTTTGAGTGCGTGGAGGTTGAGCACTTGGCGGAATCATCGTTGGTATCTGTGGCTGCAACTTTGGGACTTGGTTTGTGTTGAGAAGGAATGACTGTGCCGGCCTTAGACTGATCTCATCAGCGTTGAGCGATCCTTTCTTGATGAAACGCGGTGCCATGTCCTTAGACTGAGCCTGCTGTTGTTGCGAGTGATTCTGGTTCTGGAAGATTTGATTCTGACGAATCTGGTTAATCGTCTTTGGTCCATTATCGATAAAAGCTTTGCGAGCCACCCAATTGTTCTCTCGCAACTCCACTGAATCCTGCACCAGGAAACGAATCCTTGCCGGCAAGTCCTTGTTGTTCATTAAGGATTTCATACGGCCAAAGTACTGATCCATTAAAGACCTAGCCTTTTCATGATCGAGTCTAGGCCCCACTGTTCTCATTATCTGACAGAGGCACTCCAAATCTTCCCCCATATCCTTAAGTTGGACTCTCTTCTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU605959 True 818 TUCP 0.48 6 65847623 65849441

Neighbor

gene id symbol gene type direction distance location
LOC110526370 LOC106562103 coding upstream 4054 65833759 ~ 65843569 (+)
LOC110526368 LOC106587203 coding upstream 54943 65774787 ~ 65792680 (+)
LOC110526366 LOC106587204 coding upstream 76233 65768783 ~ 65771390 (+)
LOC110526364 LOC106587206 coding upstream 267158 65575069 ~ 65580465 (+)
LOC110526363 LOC106587208 coding upstream 326025 65441092 ~ 65521598 (+)
LOC110526373 LOC106587200 coding downstream 98978 65948419 ~ 66035381 (+)
LOC110526374 LOC100196685 coding downstream 235678 66085119 ~ 66098315 (+)
dkk3a LOC106562112 coding downstream 478290 66327731 ~ 66332554 (+)
pkd1l2a LOC106587186 coding downstream 611282 66460723 ~ 66500000 (+)
LOC110526388 LOC106587185 coding downstream 657470 66506911 ~ 66565353 (+)
G535151 NA non-coding upstream 1366 65844972 ~ 65846257 (+)
G535166 NA non-coding upstream 3276 65843849 ~ 65844347 (+)
G535162 NA non-coding upstream 16386 65831035 ~ 65831237 (+)
G535158 LOC106562099 non-coding upstream 19700 65827377 ~ 65827923 (+)
G535156 NA non-coding upstream 22188 65824997 ~ 65825435 (+)
G535176 NA non-coding downstream 27227 65876668 ~ 65876921 (+)
G535177 NA non-coding downstream 27502 65876943 ~ 65877244 (+)
G535182 NA non-coding downstream 33285 65882726 ~ 65883012 (+)
G535194 NA non-coding downstream 48068 65897509 ~ 65930401 (+)
G535358 NA non-coding downstream 297144 66146585 ~ 66146855 (+)
LOC110526356 LOC106587213 other upstream 686293 65065380 ~ 65178884 (+)
G534653 NA other upstream 729667 65113280 ~ 65169563 (+)
G534453 NA other upstream 1000519 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 1071287 64769099 ~ 64781704 (+)
G532489 NA other upstream 2503868 63308533 ~ 63343755 (+)
G536406 NA other downstream 753344 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1163779 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1254865 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1260235 67109676 ~ 67110628 (+)
G537606 NA other downstream 1905115 67754556 ~ 67756618 (+)

Expression


Co-expression Network