Gene
RNA
| Item | Value |
|---|---|
| gene id | G535938 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 65872276 ~ 65872479 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU606831 | True | 204 | lncRNA | 0.47 | 1 | 65872276 | 65872479 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526372 | LOC106587155 | coding | downstream | 21194 | 65844958 ~ 65851082 (-) |
| LOC110526945 | LOC106562099 | coding | downstream | 44199 | 65826929 ~ 65828077 (-) |
| LOC110526367 | LOC106587202 | coding | downstream | 51939 | 65798073 ~ 65820337 (-) |
| LOC110526369 | xlkd1 | coding | downstream | 76608 | 65792819 ~ 65795668 (-) |
| LOC110526365 | LOC106587205 | coding | downstream | 106894 | 65600097 ~ 65765382 (-) |
| LOC100499618 | LOC106587199 | coding | upstream | 225838 | 66098317 ~ 66122139 (-) |
| LOC110526375 | LOC106587197 | coding | upstream | 307147 | 66179626 ~ 66181802 (-) |
| LOC110526376 | LOC106587195 | coding | upstream | 311748 | 66184227 ~ 66252048 (-) |
| LOC110526378 | LOC106587194 | coding | upstream | 387224 | 66259703 ~ 66271100 (-) |
| LOC110526379 | LOC106587193 | coding | upstream | 404683 | 66277162 ~ 66326558 (-) |
| G535934 | NA | non-coding | downstream | 13029 | 65859028 ~ 65859247 (-) |
| G535925 | ctr9 | non-coding | downstream | 30029 | 65840709 ~ 65842247 (-) |
| G535905 | NA | non-coding | downstream | 74841 | 65795989 ~ 65797435 (-) |
| G535798 | NA | non-coding | downstream | 273466 | 65598469 ~ 65598810 (-) |
| G535796 | NA | non-coding | downstream | 275782 | 65596266 ~ 65596494 (-) |
| G535946 | NA | non-coding | upstream | 10375 | 65882854 ~ 65883080 (-) |
| G535958 | NA | non-coding | upstream | 25054 | 65897533 ~ 65930393 (-) |
| G536093 | NA | non-coding | upstream | 242648 | 66115127 ~ 66116208 (-) |
| G536108 | NA | non-coding | upstream | 265217 | 66137696 ~ 66137933 (-) |
| G536125 | NA | non-coding | upstream | 286130 | 66158609 ~ 66158817 (-) |
| G534603 | NA | other | downstream | 986744 | 64855495 ~ 64895099 (-) |
| G534349 | NA | other | downstream | 1257480 | 64578798 ~ 64614796 (-) |
| G534201 | NA | other | downstream | 1372662 | 64498453 ~ 64499614 (-) |
| igdcc3 | LOC106562146 | other | downstream | 2046751 | 63823887 ~ 63944930 (-) |
| G536183 | NA | other | upstream | 390007 | 66262486 ~ 66276289 (-) |
| LOC110526387 | LOC106587187 | other | upstream | 627909 | 66499996 ~ 66505055 (-) |
| G536630 | LOC106562092 | other | upstream | 676888 | 66549367 ~ 66549974 (-) |
| G538277 | NA | other | upstream | 2269772 | 68142251 ~ 68144907 (-) |
