G535176


Basic Information

Item Value
gene id G535176
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65876668 ~ 65876921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU605987
TCATTTCTTAAGTTCTAGACATCAGcggaatctggtaatgaatggtgtggctgttgaacaagttaaggagactaaattacttggcattaccttagattgtaaactgtcatggtcaaaacatatagattcaatggttgcaaagatggggagaggtctagccataataaagagatgctctgcttttttgacaccacactccaaaaagaaagttctgcaggctctagttttgtctaatcttgattattctCCAGGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU605987 True 254 lncRNA 0.38 1 65876668 65876921

Neighbor

gene id symbol gene type direction distance location
LOC110526370 LOC106562103 coding upstream 33099 65833759 ~ 65843569 (+)
LOC110526368 LOC106587203 coding upstream 83988 65774787 ~ 65792680 (+)
LOC110526366 LOC106587204 coding upstream 105278 65768783 ~ 65771390 (+)
LOC110526364 LOC106587206 coding upstream 296203 65575069 ~ 65580465 (+)
LOC110526363 LOC106587208 coding upstream 355070 65441092 ~ 65521598 (+)
LOC110526373 LOC106587200 coding downstream 71498 65948419 ~ 66035381 (+)
LOC110526374 LOC100196685 coding downstream 208198 66085119 ~ 66098315 (+)
dkk3a LOC106562112 coding downstream 450810 66327731 ~ 66332554 (+)
pkd1l2a LOC106587186 coding downstream 583802 66460723 ~ 66500000 (+)
LOC110526388 LOC106587185 coding downstream 629990 66506911 ~ 66565353 (+)
G535151 NA non-coding upstream 30411 65844972 ~ 65846257 (+)
G535166 NA non-coding upstream 32321 65843849 ~ 65844347 (+)
G535162 NA non-coding upstream 45431 65831035 ~ 65831237 (+)
G535158 LOC106562099 non-coding upstream 48745 65827377 ~ 65827923 (+)
G535156 NA non-coding upstream 51233 65824997 ~ 65825435 (+)
G535177 NA non-coding downstream 22 65876943 ~ 65877244 (+)
G535182 NA non-coding downstream 5805 65882726 ~ 65883012 (+)
G535194 NA non-coding downstream 20588 65897509 ~ 65930401 (+)
G535358 NA non-coding downstream 269664 66146585 ~ 66146855 (+)
G536174 NA non-coding downstream 379763 66256684 ~ 66261444 (+)
G535150 LOC106587155 other upstream 27227 65847623 ~ 65849441 (+)
LOC110526356 LOC106587213 other upstream 715338 65065380 ~ 65178884 (+)
G534653 NA other upstream 758712 65113280 ~ 65169563 (+)
G534453 NA other upstream 1029564 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 1100332 64769099 ~ 64781704 (+)
G536406 NA other downstream 725864 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1136299 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1227385 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1232755 67109676 ~ 67110628 (+)
G537606 NA other downstream 1877635 67754556 ~ 67756618 (+)

Expression


Co-expression Network