G535194


Basic Information

Item Value
gene id G535194
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65897509 ~ 65930401 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU606006
caaacataaagatataaaactgtattttttgtgaagaatcaacaacaagtgggacacaatcatgaagtctgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU606006 True 300 lncRNA 0.39 2 65897509 65930401

Neighbor

gene id symbol gene type direction distance location
LOC110526370 LOC106562103 coding upstream 53940 65833759 ~ 65843569 (+)
LOC110526368 LOC106587203 coding upstream 104829 65774787 ~ 65792680 (+)
LOC110526366 LOC106587204 coding upstream 126119 65768783 ~ 65771390 (+)
LOC110526364 LOC106587206 coding upstream 317044 65575069 ~ 65580465 (+)
LOC110526363 LOC106587208 coding upstream 375911 65441092 ~ 65521598 (+)
LOC110526373 LOC106587200 coding downstream 18018 65948419 ~ 66035381 (+)
LOC110526374 LOC100196685 coding downstream 154718 66085119 ~ 66098315 (+)
dkk3a LOC106562112 coding downstream 397330 66327731 ~ 66332554 (+)
pkd1l2a LOC106587186 coding downstream 530322 66460723 ~ 66500000 (+)
LOC110526388 LOC106587185 coding downstream 576510 66506911 ~ 66565353 (+)
G535182 NA non-coding upstream 14497 65882726 ~ 65883012 (+)
G535177 NA non-coding upstream 20265 65876943 ~ 65877244 (+)
G535176 NA non-coding upstream 20588 65876668 ~ 65876921 (+)
G535151 NA non-coding upstream 51252 65844972 ~ 65846257 (+)
G535166 NA non-coding upstream 53162 65843849 ~ 65844347 (+)
G535358 NA non-coding downstream 216184 66146585 ~ 66146855 (+)
G536174 NA non-coding downstream 326283 66256684 ~ 66261444 (+)
G536188 NA non-coding downstream 346150 66276551 ~ 66276752 (+)
G536192 NA non-coding downstream 352676 66283077 ~ 66284653 (+)
G536218 NA non-coding downstream 402308 66332709 ~ 66334248 (+)
G535150 LOC106587155 other upstream 48068 65847623 ~ 65849441 (+)
LOC110526356 LOC106587213 other upstream 736179 65065380 ~ 65178884 (+)
G534653 NA other upstream 779553 65113280 ~ 65169563 (+)
G534453 NA other upstream 1050405 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 1121173 64769099 ~ 64781704 (+)
G536406 NA other downstream 672384 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1082819 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1173905 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1179275 67109676 ~ 67110628 (+)
G537606 NA other downstream 1824155 67754556 ~ 67756618 (+)

Expression


Co-expression Network