Gene
RNA
| Item | Value |
|---|---|
| gene id | G535358 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 66146585 ~ 66146855 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU606182 | True | 271 | lncRNA | 0.41 | 1 | 66146585 | 66146855 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526374 | LOC100196685 | coding | upstream | 48270 | 66085119 ~ 66098315 (+) |
| LOC110526373 | LOC106587200 | coding | upstream | 111204 | 65948419 ~ 66035381 (+) |
| LOC110526370 | LOC106562103 | coding | upstream | 303016 | 65833759 ~ 65843569 (+) |
| LOC110526368 | LOC106587203 | coding | upstream | 353905 | 65774787 ~ 65792680 (+) |
| LOC110526366 | LOC106587204 | coding | upstream | 375195 | 65768783 ~ 65771390 (+) |
| dkk3a | LOC106562112 | coding | downstream | 180876 | 66327731 ~ 66332554 (+) |
| pkd1l2a | LOC106587186 | coding | downstream | 313868 | 66460723 ~ 66500000 (+) |
| LOC110526388 | LOC106587185 | coding | downstream | 360056 | 66506911 ~ 66565353 (+) |
| LOC110526389 | LOC106587184 | coding | downstream | 428635 | 66575490 ~ 66591573 (+) |
| LOC110526391 | LOC106587183 | coding | downstream | 445726 | 66592581 ~ 66596719 (+) |
| G535194 | NA | non-coding | upstream | 216184 | 65897509 ~ 65930401 (+) |
| G535182 | NA | non-coding | upstream | 263573 | 65882726 ~ 65883012 (+) |
| G535177 | NA | non-coding | upstream | 269341 | 65876943 ~ 65877244 (+) |
| G535176 | NA | non-coding | upstream | 269664 | 65876668 ~ 65876921 (+) |
| G535151 | NA | non-coding | upstream | 300328 | 65844972 ~ 65846257 (+) |
| G536174 | NA | non-coding | downstream | 109829 | 66256684 ~ 66261444 (+) |
| G536188 | NA | non-coding | downstream | 129696 | 66276551 ~ 66276752 (+) |
| G536192 | NA | non-coding | downstream | 136222 | 66283077 ~ 66284653 (+) |
| G536218 | NA | non-coding | downstream | 185854 | 66332709 ~ 66334248 (+) |
| G536220 | LOC106587191 | non-coding | downstream | 193258 | 66340113 ~ 66340522 (+) |
| G535150 | LOC106587155 | other | upstream | 297144 | 65847623 ~ 65849441 (+) |
| LOC110526356 | LOC106587213 | other | upstream | 985255 | 65065380 ~ 65178884 (+) |
| G534653 | NA | other | upstream | 1028629 | 65113280 ~ 65169563 (+) |
| G534453 | NA | other | upstream | 1299481 | 64790322 ~ 64847104 (+) |
| LOC110526344 | LOC106587225 | other | upstream | 1370249 | 64769099 ~ 64781704 (+) |
| G536406 | NA | other | downstream | 455930 | 66602785 ~ 66604053 (+) |
| G536995 | zfhx3 | other | downstream | 866365 | 67013220 ~ 67018653 (+) |
| G537029 | zfhx3 | other | downstream | 957451 | 67104306 ~ 67104908 (+) |
| G537032 | LOC106587324 | other | downstream | 962821 | 67109676 ~ 67110628 (+) |
| G537606 | NA | other | downstream | 1607701 | 67754556 ~ 67756618 (+) |
