G536192


Basic Information

Item Value
gene id G536192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 66283077 ~ 66284653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU607111
gcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagagattTGATTACTTTGTTCTCTGACTAAGGCCACTGTTGGGGAAATTAGTAAAGTTCTTTCATCAAAATAAGAGTCTCAGCTCAAAAGTATGGCCACAGAAGAGGAGGGAATGTTTTCTCATTATGGTTAGCTGGTGGGCCTGTCTGGATGCTTCAGATTGCACTGACTGCACGGCGCTGGCTCAAAATGATCAGAAATCTGTGGACAGGGAGGGGCAGTCTAACCCACAAAGTGCAGCACCACAAAAATACATTCAACCATTGCATGAGAGGCCCCAGGATAGCTAAAAAAACATCTCAAATGCTTCTTGCATGCAAGACCTTTGTGTCTACACGTGTCCTTTGTGATTTAGAGGATAGTACAAGTTACTTTAGCAGGCATGTGGCGCTGGGGGCAAAATACCTGTTTGACGTTATTAAAACCAGGTTCTGGCTTTGGTTGTAGTATTGCAGTGCGTTGTTGTTGGGATATATATGTGGAGCCACTGCTGTGACACTGAAACAGCAACATGACTGTGATGTTAATAACTACAACTGTAATTTACAGGCAAATTAGATTTgaagttaaacaaatatatacttCTAAAATATATACAATTTACCAGATTACATAATGTTTAAAATCAAACAGACAGCACTGCATTTTGTGTTTCTCTGAGAGGCAGCAGGCTCTGCATATAGAAATGATGTGGCCATAAATAGTGCTATGGTTTGGAGGCACACAAGAGTCACTCACCACATGTGACTCATTCAAGGGATCTCTTTGCATTTCTTTCTTACAAAGCTGCATATCTAGTGCCCCAGATTGACTGGTCTTTGGTTTTCCATGAAGAAGGAAGGAATTAGAGGAAACAGAGAAGAAAACTTAGTTTAACAGTTCAGTGACAGATAAGGGATAGATTAGTGCATCAAAATAATAGCATCATGTCTGCTCTGACATTAGGGGATATGGGTTTCATGATGACAGACAGATGGTGAGAAATGGATGTGCTTGTTTTCACCTTGAGTTGGAGTAGAATGGATGAGGATGAAGACACGGTTTGAGGGAGTGAGAAGGTAGAAAGGGTGATTTCTGGACAAAGGAGGGAAGTGACTTTAGGAGTGGGagcagggaggatgggaggagagggaatggTCTGTTCAGCAGATCCAGACTAGGGTGGGAATGGGAAACAGAGGAATGGAAAGTCAAAGAGGGAGAGGATTGTTAAAAGAGAGACTGAGAATCAGAT

Function

NR:

description
F-actin-methionine sulfoxide oxidase MICAL2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU607111 True 1505 lncRNA 0.40 2 66283077 66284653

Neighbor

gene id symbol gene type direction distance location
LOC110526374 LOC100196685 coding upstream 184762 66085119 ~ 66098315 (+)
LOC110526373 LOC106587200 coding upstream 247696 65948419 ~ 66035381 (+)
LOC110526370 LOC106562103 coding upstream 439508 65833759 ~ 65843569 (+)
LOC110526368 LOC106587203 coding upstream 490397 65774787 ~ 65792680 (+)
LOC110526366 LOC106587204 coding upstream 511687 65768783 ~ 65771390 (+)
dkk3a LOC106562112 coding downstream 43078 66327731 ~ 66332554 (+)
pkd1l2a LOC106587186 coding downstream 176070 66460723 ~ 66500000 (+)
LOC110526388 LOC106587185 coding downstream 222258 66506911 ~ 66565353 (+)
LOC110526389 LOC106587184 coding downstream 290837 66575490 ~ 66591573 (+)
LOC110526391 LOC106587183 coding downstream 307928 66592581 ~ 66596719 (+)
G536188 NA non-coding upstream 6325 66276551 ~ 66276752 (+)
G536174 NA non-coding upstream 21633 66256684 ~ 66261444 (+)
G535358 NA non-coding upstream 136222 66146585 ~ 66146855 (+)
G535194 NA non-coding upstream 352676 65897509 ~ 65930401 (+)
G535182 NA non-coding upstream 400065 65882726 ~ 65883012 (+)
G536218 NA non-coding downstream 48056 66332709 ~ 66334248 (+)
G536220 LOC106587191 non-coding downstream 55460 66340113 ~ 66340522 (+)
G536329 NA non-coding downstream 129763 66414416 ~ 66437171 (+)
G536348 NA non-coding downstream 162352 66447005 ~ 66449264 (+)
G536371 NA non-coding downstream 203912 66488565 ~ 66492463 (+)
G535150 LOC106587155 other upstream 433636 65847623 ~ 65849441 (+)
LOC110526356 LOC106587213 other upstream 1121747 65065380 ~ 65178884 (+)
G534653 NA other upstream 1165121 65113280 ~ 65169563 (+)
G534453 NA other upstream 1435973 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 1506741 64769099 ~ 64781704 (+)
G536406 NA other downstream 318132 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 728567 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 819653 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 825023 67109676 ~ 67110628 (+)
G537606 NA other downstream 1469903 67754556 ~ 67756618 (+)

Expression


Co-expression Network