G536630 (LOC106562092)


Basic Information

Item Value
gene id G536630
gene name LOC106562092
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 66549367 ~ 66549974 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU607613
CAGGCCTTGCTGTCTGAGCCCAGCTGTGAGAGCACAAAGTGAGGCCCTTTGGCACTGTCTGCATCAAACACGTCCATGCTGGCCTCCTCGGCCGAGGCAGGCTTGGGCCCGGGTCGCTGGCGGGGGGTGCGCTTGCGCGACTTCCGGGGCACCTCTGTGTTGTCGTTGTAGGAGCTGGAGCTCTGCTCGGAGTCCTGGAGCTGATCCTCCTGGCAGGACATGCGGCTGTCGTCAAACAGGTCCTCGGGCGGAGGCGAGATGTTCAGCACCGTGCGCCGCTTGGAGGGCGTCATCTGGTGGTGCTGCTGGGCCTCCTGGGAtgccccccctcttcctcctccacctagGGATCCGGCCCCTCCTCCTTTCTCGCCACCAGCACTCCCACTGTTGCCGGTCCCGCCCTCGGCGCCAAGCATCTCCGCCACCGCTCTGCTACTTACACCTTCGTCTGGAGCGCCGATGCCGGTGTGAGCAGAGGTCTGGTCAGTGGCTGAAGTAGTGGAGTGCATGGTGGAGCTGGAAGAGGTGGGAAAAGCACTGCGAGGGCCTCCCATGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU607613 True 560 TUCP 0.65 2 66549367 66549974

Neighbor

gene id symbol gene type direction distance location
LOC110526387 LOC106587187 coding downstream 44312 66499996 ~ 66505055 (-)
LOC118964921 LOC106587186 coding downstream 61340 66485280 ~ 66488027 (-)
LOC110526385 LOC101448035 coding downstream 96715 66448244 ~ 66452652 (-)
bco1 bcmo1 coding downstream 110760 66406013 ~ 66438607 (-)
LOC110526384 LOC106587189 coding downstream 143458 66401753 ~ 66405909 (-)
LOC110526397 LOC106562084 coding upstream 254384 66804358 ~ 66819558 (-)
LOC110526396 LOC106562084 coding upstream 277280 66827254 ~ 66872098 (-)
LOC110526398 LOC106562084 coding upstream 372983 66922957 ~ 66971031 (-)
LOC110526399 zfhx3 coding upstream 455321 67005295 ~ 67176656 (-)
LOC110526402 LOC106587327 coding upstream 1027767 67577741 ~ 67594801 (-)
G536632 NA non-coding downstream 85103 66413296 ~ 66464264 (-)
LOC110526383 LOC106587190 non-coding downstream 180573 66360855 ~ 66398419 (-)
G536290 NA non-coding downstream 220058 66328602 ~ 66329309 (-)
G536288 NA non-coding downstream 221959 66327184 ~ 66327408 (-)
G536717 NA non-coding upstream 20033 66570007 ~ 66570347 (-)
G536721 NA non-coding upstream 23291 66573265 ~ 66573486 (-)
G536726 NA non-coding upstream 32643 66582617 ~ 66586669 (-)
G536735 NA non-coding upstream 51480 66601454 ~ 66602161 (-)
G536739 NA non-coding upstream 53239 66603213 ~ 66604041 (-)
LOC110526379 LOC106587193 other downstream 267748 66277162 ~ 66326558 (-)
G536183 NA other downstream 273078 66262486 ~ 66276289 (-)
LOC110526365 LOC106587205 other downstream 923395 65600097 ~ 65765382 (-)
G534603 NA other downstream 1663835 64855495 ~ 64895099 (-)
G538277 NA other upstream 1592277 68142251 ~ 68144907 (-)
G538460 LOC106587433 other upstream 1960341 68510315 ~ 68516681 (-)
LOC110526447 LOC106587408 other upstream 2257439 68807413 ~ 68816777 (-)
LOC110526455 LOC106587401 other upstream 2399546 68949510 ~ 68953699 (-)
G539306 NA other upstream 2452769 69002743 ~ 69005665 (-)

Expression


Co-expression Network