G536832


Basic Information

Item Value
gene id G536832
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 66751141 ~ 66753441 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU607829
ACGAATATAAAAGGGTTTTATGCCTTCAAGAGTACAATTTTAGTCCAATCATTAGAATTCAACAACACTCACTACATAGGGCAGTATTTTTTAATTGCTAATGGATGTGCATAGGAAGAGACAAAAATATATCCTGCACAATGTGTGTAATGCAATAGAATTAATCCaggttataatatatataacacacaCCAATGATCTCATACTTAATGTTTTTTAAAGCATAGTATCACCAAAATAAATGCTTAAATAAATGCTTAAAAGTAACTAGAAAAGGGGGAGTTGGGGATAAGTACATTTCACTTTTAAATAATATCAATTTAACTTATCAATACCACATCAAGAGAATATACATGGCGTGGAGCCTTTGTAAGGCAAAATATAGATATTCCGAGAACGAGGCCTACTCAATCAGTCGATGCATGCATGCAACGCAATTAATGGCTGAACATAAATGATGTACTTTAACTATGAGGCATACTGTTCAATCAAGTCATTGGTTCAAATCAATTATACTTTTTAAAGTTTGAAATGACAAATTGCATGACAATCTATTCTCAAGCAAACCGATAGCTTTTCCTATGTTATTCAGTCACCAGATATGAAATACTGGGCAGCAGTCTGAGGAGAATTAAGACTCATGAGGAGTATGCAACTTAACCTAAACTAAAAAAACATGCTAATCAGATTTCTCAGTGTAAGAAAACAGCATTCATTCTTATAGATATGACCCCATAACCCCATAGGTTGCCACAACcttaatgtagtcattgcgtgctatgaatatgggaccaaatacttcacTTTCTACAActttaatacacaagtgaatttgtcccattTGGtctcctaaaatggggggactatgtacaaaaagtgttttaatttctaaacagttcacccgatatggatgaaaacacCCTGACAGTCTGCACCTTAACCACATACtcattgtatcatttaaaatcTAAAGTGCTGGagtagagccaaaacaacaacaaaaatcactgtcccaatacttttggagctcactgtacaaGTCCCACAAAGCAGATAGCGACAAGAGTTTGCAGATATACATTACAGTTGAGATCACTTGCATATGAATAACTAACTTAAAAAGACACCACACAGTCCCACAAAGCAGATAGCGACAAGAGTTTGCAGATATACATTACAGTTGAGATCACTTGCATATGAATAACTAACTTAAAAAGACACCACACAATAAGTATCAAAAGGCAGAGTGCGTAAATAATATGAATAGATTAGAAAACAATTTAGAGACTAAGGGGAGAAAGTTTCCAGATGCATCTCACCCCACAGCCTGTTGGGTGAGGTCTAGAAAAGAAAGCAGAGGGGCAAGGGGATTGTTTTATCctttccctccctttccttcAAGGTGAGGGCACTGTATGAGTTGAGTGGGACACCTCTGAAAAGTTGTGTACGTTCAATGCAAGGGGGGTTTGGTCAAACATATCAAGGCCTCCAGACAGAAAGAATGAGAAGCGACGACAGCGTCAGGGCTCAGGAAGACTTGCGCTCCAGCATGTAGTATCGATACATGATACCCACAACAACTGCAGCTATGGCAGGTATCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU607829 True 1606 lncRNA 0.37 2 66751141 66753441

Neighbor

gene id symbol gene type direction distance location
LOC110526387 LOC106587187 coding downstream 246086 66499996 ~ 66505055 (-)
LOC118964921 LOC106587186 coding downstream 263114 66485280 ~ 66488027 (-)
LOC110526385 LOC101448035 coding downstream 298489 66448244 ~ 66452652 (-)
bco1 bcmo1 coding downstream 312534 66406013 ~ 66438607 (-)
LOC110526384 LOC106587189 coding downstream 345232 66401753 ~ 66405909 (-)
LOC110526397 LOC106562084 coding upstream 50917 66804358 ~ 66819558 (-)
LOC110526396 LOC106562084 coding upstream 73813 66827254 ~ 66872098 (-)
LOC110526398 LOC106562084 coding upstream 169516 66922957 ~ 66971031 (-)
LOC110526399 zfhx3 coding upstream 251854 67005295 ~ 67176656 (-)
LOC110526402 LOC106587327 coding upstream 824300 67577741 ~ 67594801 (-)
G536742 NA non-coding downstream 145354 66605531 ~ 66605787 (-)
G536741 NA non-coding downstream 145727 66605177 ~ 66605414 (-)
G536740 NA non-coding downstream 146291 66604651 ~ 66604850 (-)
G536739 NA non-coding downstream 147100 66603213 ~ 66604041 (-)
G536735 NA non-coding downstream 148980 66601454 ~ 66602161 (-)
G536897 NA non-coding upstream 129813 66883254 ~ 66884892 (-)
G536899 NA non-coding upstream 131509 66884950 ~ 66885948 (-)
G536964 NA non-coding upstream 223764 66977205 ~ 66977656 (-)
G536967 NA non-coding upstream 227834 66981275 ~ 66981507 (-)
G536968 NA non-coding upstream 228776 66982217 ~ 66982437 (-)
G536630 LOC106562092 other downstream 201167 66549367 ~ 66549974 (-)
LOC110526379 LOC106587193 other downstream 469522 66277162 ~ 66326558 (-)
G536183 NA other downstream 474852 66262486 ~ 66276289 (-)
LOC110526365 LOC106587205 other downstream 1125169 65600097 ~ 65765382 (-)
G538277 NA other upstream 1388810 68142251 ~ 68144907 (-)
G538460 LOC106587433 other upstream 1756874 68510315 ~ 68516681 (-)
LOC110526447 LOC106587408 other upstream 2053972 68807413 ~ 68816777 (-)
LOC110526455 LOC106587401 other upstream 2196079 68949510 ~ 68953699 (-)
G539306 NA other upstream 2249302 69002743 ~ 69005665 (-)

Expression


Co-expression Network