G536994


Basic Information

Item Value
gene id G536994
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67012171 ~ 67012394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608018
TTAATAACTGAGCACTTTATTGAAGATAAATGTTTTTCACCAGAGGTCATTAATTTGATAGGATTTGCTGATTCAACGTTAGCCAATCAGAAACTCAGCCTTTCCAGGAAGGCCCATGAGAAGAGGTCTCAATCACAATATTTACTAGAGTTAATCAATCAAGAAGTAGCTGggcaataataaagaaaacaacagACAAACTGAGGATTTAGATACATCTTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608018 True 224 lncRNA 0.35 1 67012171 67012394

Neighbor

gene id symbol gene type direction distance location
LOC110526948 LOC106562086 coding upstream 235839 66756330 ~ 66776332 (+)
LOC110526393 LOC106587180 coding upstream 258731 66748816 ~ 66753440 (+)
LOC110526947 LOC105029748 coding upstream 291730 66719808 ~ 66720441 (+)
LOC110526392 LOC106587181 coding upstream 364748 66609230 ~ 66647423 (+)
LOC118965116 NA coding upstream 410402 66601685 ~ 66601769 (+)
LOC110526401 LOC106587347 coding downstream 515748 67528142 ~ 67544856 (+)
LOC110526949 mald3 coding downstream 631420 67643814 ~ 67644573 (+)
LOC110526406 LOC106587353 coding downstream 724416 67736810 ~ 67753397 (+)
LOC110526410 myo1e coding downstream 836880 67849274 ~ 67897779 (+)
LOC110526412 LOC106587340 coding downstream 947420 67959814 ~ 67973591 (+)
G536585 NA non-coding upstream 79616 66928565 ~ 66932555 (+)
G536409 NA non-coding upstream 360661 66648557 ~ 66651510 (+)
G536400 NA non-coding upstream 425054 66583358 ~ 66587117 (+)
G536394 NA non-coding upstream 438320 66573556 ~ 66573851 (+)
G536393 NA non-coding upstream 438675 66573241 ~ 66573496 (+)
G537000 NA non-coding downstream 24235 67036629 ~ 67036990 (+)
G537004 NA non-coding downstream 27966 67040360 ~ 67040589 (+)
G537007 NA non-coding downstream 35895 67048289 ~ 67048510 (+)
G537014 NA non-coding downstream 60740 67073134 ~ 67073374 (+)
G537018 NA non-coding downstream 65091 67077485 ~ 67077711 (+)
G536406 NA other upstream 408118 66602785 ~ 66604053 (+)
G535150 LOC106587155 other upstream 1162730 65847623 ~ 65849441 (+)
LOC110526356 LOC106587213 other upstream 1850841 65065380 ~ 65178884 (+)
G534653 NA other upstream 1894215 65113280 ~ 65169563 (+)
G534453 NA other upstream 2165067 64790322 ~ 64847104 (+)
G536995 zfhx3 other downstream 826 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 91912 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 97282 67109676 ~ 67110628 (+)
G537606 NA other downstream 742162 67754556 ~ 67756618 (+)
G537617 atxn1l other downstream 754362 67766756 ~ 67767613 (+)

Expression


Co-expression Network