G537007


Basic Information

Item Value
gene id G537007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67048289 ~ 67048510 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608033
attgctcttaaatgcaagtaaaactaagtgcatgctcttcaaccgattgctgcccgcaccctcccgcccgactagcatcactactctggacggttctgacttagaatatgtggacaactataaatacctaggtgtctggttagactataaactctcattccagactcatattaagcatctacaatccaaaattaaatctagaattggcttcctattttgcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608033 True 222 lncRNA 0.41 1 67048289 67048510

Neighbor

gene id symbol gene type direction distance location
LOC110526948 LOC106562086 coding upstream 271957 66756330 ~ 66776332 (+)
LOC110526393 LOC106587180 coding upstream 294849 66748816 ~ 66753440 (+)
LOC110526947 LOC105029748 coding upstream 327848 66719808 ~ 66720441 (+)
LOC110526392 LOC106587181 coding upstream 400866 66609230 ~ 66647423 (+)
LOC118965116 NA coding upstream 446520 66601685 ~ 66601769 (+)
LOC110526401 LOC106587347 coding downstream 479632 67528142 ~ 67544856 (+)
LOC110526949 mald3 coding downstream 595304 67643814 ~ 67644573 (+)
LOC110526406 LOC106587353 coding downstream 688300 67736810 ~ 67753397 (+)
LOC110526410 myo1e coding downstream 800764 67849274 ~ 67897779 (+)
LOC110526412 LOC106587340 coding downstream 911304 67959814 ~ 67973591 (+)
G537004 NA non-coding upstream 7700 67040360 ~ 67040589 (+)
G537000 NA non-coding upstream 11299 67036629 ~ 67036990 (+)
G536994 NA non-coding upstream 35895 67012171 ~ 67012394 (+)
G536585 NA non-coding upstream 115734 66928565 ~ 66932555 (+)
G536409 NA non-coding upstream 396779 66648557 ~ 66651510 (+)
G537014 NA non-coding downstream 24624 67073134 ~ 67073374 (+)
G537018 NA non-coding downstream 28975 67077485 ~ 67077711 (+)
G537019 NA non-coding downstream 29386 67077896 ~ 67078113 (+)
G537021 NA non-coding downstream 34575 67083085 ~ 67083324 (+)
G537022 NA non-coding downstream 37867 67086377 ~ 67086615 (+)
G536995 zfhx3 other upstream 29636 67013220 ~ 67018653 (+)
G536406 NA other upstream 444236 66602785 ~ 66604053 (+)
G535150 LOC106587155 other upstream 1198848 65847623 ~ 65849441 (+)
LOC110526356 LOC106587213 other upstream 1886959 65065380 ~ 65178884 (+)
G534653 NA other upstream 1930333 65113280 ~ 65169563 (+)
G537029 zfhx3 other downstream 55796 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 61166 67109676 ~ 67110628 (+)
G537606 NA other downstream 706046 67754556 ~ 67756618 (+)
G537617 atxn1l other downstream 718246 67766756 ~ 67767613 (+)
LOC110526436 LOC107688027 other downstream 1630867 68679317 ~ 68681675 (+)

Expression


Co-expression Network