G537028


Basic Information

Item Value
gene id G537028
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67102182 ~ 67102389 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608054
aatggatttaaatggtgctccatgggatgttcaaagtttcacatatttttttataacccaaccctgaactGTAGTcgtccacaactttgtccctgacctgtttggagagctccttggtcttcatggtgcctcttgcttagtggtgttgcagactctggggcctttcagaacaggtgtatatatactgagatcgtgTGACAGACACTTA

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608054 True 208 lncRNA 0.44 1 67102182 67102389

Neighbor

gene id symbol gene type direction distance location
LOC110526948 LOC106562086 coding upstream 325850 66756330 ~ 66776332 (+)
LOC110526393 LOC106587180 coding upstream 348742 66748816 ~ 66753440 (+)
LOC110526947 LOC105029748 coding upstream 381741 66719808 ~ 66720441 (+)
LOC110526392 LOC106587181 coding upstream 454759 66609230 ~ 66647423 (+)
LOC118965116 NA coding upstream 500413 66601685 ~ 66601769 (+)
LOC110526401 LOC106587347 coding downstream 425753 67528142 ~ 67544856 (+)
LOC110526949 mald3 coding downstream 541425 67643814 ~ 67644573 (+)
LOC110526406 LOC106587353 coding downstream 634421 67736810 ~ 67753397 (+)
LOC110526410 myo1e coding downstream 746885 67849274 ~ 67897779 (+)
LOC110526412 LOC106587340 coding downstream 857425 67959814 ~ 67973591 (+)
G537027 NA non-coding upstream 317 67101662 ~ 67101865 (+)
G537026 NA non-coding upstream 6578 67095394 ~ 67095604 (+)
G537023 NA non-coding upstream 10028 67091911 ~ 67092154 (+)
G537022 NA non-coding upstream 15567 67086377 ~ 67086615 (+)
G537021 NA non-coding upstream 18858 67083085 ~ 67083324 (+)
G537031 LOC106587324 non-coding downstream 6423 67108812 ~ 67109391 (+)
G537035 NA non-coding downstream 14583 67116972 ~ 67117192 (+)
G537036 NA non-coding downstream 17998 67120387 ~ 67120795 (+)
G537037 NA non-coding downstream 18503 67120892 ~ 67121170 (+)
G537038 NA non-coding downstream 24808 67127197 ~ 67127432 (+)
G536995 zfhx3 other upstream 83529 67013220 ~ 67018653 (+)
G536406 NA other upstream 498129 66602785 ~ 66604053 (+)
G535150 LOC106587155 other upstream 1252741 65847623 ~ 65849441 (+)
LOC110526356 LOC106587213 other upstream 1940852 65065380 ~ 65178884 (+)
G534653 NA other upstream 1984226 65113280 ~ 65169563 (+)
G537029 zfhx3 other downstream 1917 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 7287 67109676 ~ 67110628 (+)
G537606 NA other downstream 652167 67754556 ~ 67756618 (+)
G537617 atxn1l other downstream 664367 67766756 ~ 67767613 (+)
LOC110526436 LOC107688027 other downstream 1576988 68679317 ~ 68681675 (+)

Expression


Co-expression Network