G537448


Basic Information

Item Value
gene id G537448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67516177 ~ 67516422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608499
gtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttgaattttggtttaatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttctt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608499 True 246 lncRNA 0.43 1 67516177 67516422

Neighbor

gene id symbol gene type direction distance location
LOC110526948 LOC106562086 coding upstream 739845 66756330 ~ 66776332 (+)
LOC110526393 LOC106587180 coding upstream 762737 66748816 ~ 66753440 (+)
LOC110526947 LOC105029748 coding upstream 795736 66719808 ~ 66720441 (+)
LOC110526392 LOC106587181 coding upstream 868754 66609230 ~ 66647423 (+)
LOC118965116 NA coding upstream 914408 66601685 ~ 66601769 (+)
LOC110526401 LOC106587347 coding downstream 11720 67528142 ~ 67544856 (+)
LOC110526949 mald3 coding downstream 127392 67643814 ~ 67644573 (+)
LOC110526406 LOC106587353 coding downstream 220388 67736810 ~ 67753397 (+)
LOC110526410 myo1e coding downstream 332852 67849274 ~ 67897779 (+)
LOC110526412 LOC106587340 coding downstream 443392 67959814 ~ 67973591 (+)
G537447 NA non-coding upstream 97 67515796 ~ 67516080 (+)
G537423 NA non-coding upstream 25302 67490629 ~ 67490875 (+)
G537399 NA non-coding upstream 57844 67458044 ~ 67458333 (+)
G537373 NA non-coding upstream 89324 67426542 ~ 67426853 (+)
G537372 NA non-coding upstream 90905 67424994 ~ 67425272 (+)
G537470 NA non-coding downstream 60655 67577077 ~ 67577389 (+)
G537473 crld2 non-coding downstream 63294 67579716 ~ 67583897 (+)
G537528 NA non-coding downstream 83319 67599741 ~ 67600186 (+)
G537529 NA non-coding downstream 84139 67600561 ~ 67631667 (+)
G537533 NA non-coding downstream 90832 67607254 ~ 67634590 (+)
G537032 LOC106587324 other upstream 405549 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 411269 67104306 ~ 67104908 (+)
G536995 zfhx3 other upstream 497524 67013220 ~ 67018653 (+)
G536406 NA other upstream 912124 66602785 ~ 66604053 (+)
G535150 LOC106587155 other upstream 1666736 65847623 ~ 65849441 (+)
G537606 NA other downstream 238134 67754556 ~ 67756618 (+)
G537617 atxn1l other downstream 250334 67766756 ~ 67767613 (+)
LOC110526436 LOC107688027 other downstream 1162955 68679317 ~ 68681675 (+)
G538561 NA other downstream 1187976 68704398 ~ 68704696 (+)
G538607 NA other downstream 1294697 68811119 ~ 68811890 (+)

Expression


Co-expression Network